The 2.0 version of rSNPBase

Variant report

Variant rs13388162
Chromosome Location chr2:191382006-191382007
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:191334800-191394800 Weak transcription HSMMtube muscle
2 chr2:191349600-191394600 Weak transcription NHLF lung
3 chr2:191351400-191385400 Weak transcription NHEK skin
4 chr2:191354600-191394600 Weak transcription HSMM muscle
5 chr2:191357200-191398200 Weak transcription Fetal Kidney kidney
6 chr2:191362800-191398200 Weak transcription Fetal Brain Male brain
7 chr2:191365000-191383200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr2:191365200-191398000 Weak transcription Rectal Smooth Muscle rectum
9 chr2:191365400-191392400 Weak transcription HepG2 liver
10 chr2:191365800-191397400 Weak transcription Liver Liver
11 chr2:191366400-191386400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr2:191367200-191393000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr2:191367400-191382400 Weak transcription NHDF-Ad bronchial
14 chr2:191369000-191394400 Weak transcription Aorta Aorta
15 chr2:191370800-191382800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr2:191370800-191394400 Weak transcription A549 lung
17 chr2:191371000-191393000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr2:191372000-191394600 Weak transcription Brain Anterior Caudate brain
19 chr2:191372200-191385400 Weak transcription Primary neutrophils fromperipheralblood blood
20 chr2:191372200-191394600 Weak transcription Brain Substantia Nigra brain
21 chr2:191373800-191390800 Weak transcription Spleen Spleen
22 chr2:191374000-191384400 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr2:191374000-191390800 Weak transcription Duodenum Mucosa Duodenum
24 chr2:191374000-191390800 Weak transcription Fetal Intestine Large intestine
25 chr2:191375200-191382400 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr2:191375200-191398600 Weak transcription Ovary ovary
27 chr2:191376000-191385000 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr2:191376000-191397800 Weak transcription Colon Smooth Muscle Colon
29 chr2:191377800-191392800 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr2:191377800-191393200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr2:191378000-191385000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr2:191378000-191385600 Weak transcription Primary monocytes fromperipheralblood blood
33 chr2:191378000-191393000 Weak transcription Fetal Intestine Small intestine
34 chr2:191378400-191384400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr2:191378400-191385400 Weak transcription Lung lung
36 chr2:191378400-191385400 Weak transcription Pancreas Pancrea
37 chr2:191378400-191392400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr2:191378400-191393200 Weak transcription Esophagus oesophagus
39 chr2:191378400-191394800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr2:191378800-191390800 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr2:191378800-191394400 Weak transcription Fetal Muscle Leg muscle
42 chr2:191378800-191394400 Weak transcription Fetal Stomach stomach
43 chr2:191379200-191382600 Genic enhancers Dnd41 blood
44 chr2:191379200-191389400 Weak transcription Primary B cells from peripheral blood blood
45 chr2:191379200-191390600 Weak transcription Monocytes-CD14+_RO01746 blood
46 chr2:191379200-191392600 Weak transcription iPS-18 Cell Line embryonic stem cell
47 chr2:191379400-191391800 Weak transcription Adipose Nuclei Adipose
48 chr2:191379400-191394000 Weak transcription Fetal Muscle Trunk muscle
49 chr2:191379400-191394000 Weak transcription Left Ventricle heart
50 chr2:191379400-191397800 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015