Variant report

Variant rs13427692
Chromosome Location chr2:190308337-190308338
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190305200-190308400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr2:190306600-190308600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
3 chr2:190306800-190308400 Flanking Active TSS Dnd41 blood
4 chr2:190306800-190309600 Enhancers Sigmoid Colon Sigmoid Colon
5 chr2:190306800-190309800 Enhancers Small Intestine intestine
6 chr2:190306800-190323000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr2:190306800-190323800 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr2:190306800-190344200 Weak transcription Esophagus oesophagus
9 chr2:190307000-190308600 Enhancers Colon Smooth Muscle Colon
10 chr2:190307000-190309600 Enhancers Primary T killer naive cells fromperipheralblood blood
11 chr2:190307000-190309800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
12 chr2:190307000-190317600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr2:190307000-190334200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr2:190307200-190308600 Enhancers Primary B cells from cord blood blood
15 chr2:190307200-190308600 Enhancers Primary T cells fromperipheralblood blood
16 chr2:190307200-190308600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
17 chr2:190307200-190308800 Enhancers Liver Liver
18 chr2:190307200-190308800 Enhancers Duodenum Smooth Muscle Duodenum
19 chr2:190307200-190309000 Enhancers NHDF-Ad bronchial
20 chr2:190307200-190309200 Enhancers Psoas Muscle Psoas
21 chr2:190307200-190309400 Enhancers Osteobl bone
22 chr2:190307200-190309600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
23 chr2:190307200-190309800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr2:190307200-190312800 Weak transcription Primary neutrophils fromperipheralblood blood
25 chr2:190307200-190313200 Weak transcription Fetal Kidney kidney
26 chr2:190307200-190313400 Weak transcription Brain Cingulate Gyrus brain
27 chr2:190307400-190308400 Enhancers Cortex derived primary cultured neurospheres brain
28 chr2:190307400-190308400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
29 chr2:190307400-190308800 Enhancers iPS-15b Cell Line embryonic stem cell
30 chr2:190307400-190309400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr2:190307400-190309600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr2:190307400-190309600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
33 chr2:190307400-190309600 Flanking Active TSS GM12878-XiMat blood
34 chr2:190307400-190311800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr2:190307400-190312200 Weak transcription Placenta Placenta
36 chr2:190307400-190312400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
37 chr2:190307400-190312800 Weak transcription Primary monocytes fromperipheralblood blood
38 chr2:190307400-190312800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr2:190307400-190313000 Weak transcription HSMMtube muscle
40 chr2:190307600-190308400 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr2:190307600-190308400 Enhancers Fetal Brain Female brain
42 chr2:190307600-190308400 Enhancers NHEK skin
43 chr2:190307600-190308600 Enhancers Primary hematopoietic stem cells blood
44 chr2:190307600-190308600 Enhancers Adipose Nuclei Adipose
45 chr2:190307600-190308800 Genic enhancers HSMM muscle
46 chr2:190307600-190309000 Enhancers Primary T regulatory cells fromperipheralblood blood
47 chr2:190307600-190309200 Enhancers Breast Myoepithelial Primary Cells Breast
48 chr2:190307600-190309200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
49 chr2:190307600-190309200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
50 chr2:190307600-190309200 Enhancers HMEC breast

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