Variant report

Variant rs28509172
Chromosome Location chr2:190313613-190313614
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190306800-190323000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr2:190306800-190323800 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr2:190306800-190344200 Weak transcription Esophagus oesophagus
4 chr2:190307000-190317600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr2:190307000-190334200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr2:190307600-190314200 Weak transcription Brain Germinal Matrix brain
7 chr2:190307600-190314800 Weak transcription Left Ventricle heart
8 chr2:190307600-190314800 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr2:190307600-190315000 Weak transcription Gastric stomach
10 chr2:190307600-190316200 Weak transcription H9 Cell Line embryonic stem cell
11 chr2:190307600-190316200 Weak transcription Rectal Smooth Muscle rectum
12 chr2:190307600-190316400 Weak transcription Colonic Mucosa Colon
13 chr2:190307600-190317000 Weak transcription Fetal Stomach stomach
14 chr2:190307600-190317200 Weak transcription Placenta Amnion Placenta Amnion
15 chr2:190307600-190317400 Weak transcription Lung lung
16 chr2:190307600-190322600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr2:190307600-190323400 Weak transcription Ovary ovary
18 chr2:190307600-190330000 Weak transcription Fetal Heart heart
19 chr2:190307600-190334200 Weak transcription Pancreas Pancrea
20 chr2:190307600-190338200 Weak transcription Spleen Spleen
21 chr2:190307600-190342000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr2:190307600-190342600 Weak transcription Aorta Aorta
23 chr2:190307800-190314000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr2:190307800-190332400 Weak transcription Stomach Mucosa stomach
25 chr2:190308000-190317000 Weak transcription Fetal Intestine Small intestine
26 chr2:190308000-190334600 Weak transcription Right Ventricle heart
27 chr2:190308200-190314800 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr2:190308200-190325000 Weak transcription Thymus Thymus
29 chr2:190308200-190328400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr2:190308200-190328600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr2:190308200-190342800 Strong transcription A549 lung
32 chr2:190308400-190329800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr2:190308600-190341800 Strong transcription Primary hematopoietic stem cells short term culture blood
34 chr2:190308600-190342200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr2:190308800-190316200 Weak transcription iPS-15b Cell Line embryonic stem cell
36 chr2:190309000-190342600 Strong transcription HUES64 Cell Line embryonic stem cell
37 chr2:190309200-190314800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr2:190309200-190327600 Weak transcription Psoas Muscle Psoas
39 chr2:190309200-190341200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
40 chr2:190309400-190315400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr2:190309400-190337200 Strong transcription HUES6 Cell Line embryonic stem cell
42 chr2:190309600-190315000 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr2:190309600-190325600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr2:190309600-190341800 Strong transcription Monocytes-CD14+_RO01746 blood
45 chr2:190309600-190342000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr2:190309800-190313800 Genic enhancers Primary T helper cells PMA-I stimulated --
47 chr2:190309800-190317200 Weak transcription Small Intestine intestine
48 chr2:190309800-190319000 Strong transcription K562 blood
49 chr2:190309800-190326400 Strong transcription Fetal Intestine Large intestine
50 chr2:190309800-190337000 Strong transcription Primary B cells from cord blood blood

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