The 2.0 version of rSNPBase

Variant report

Variant rs55819631
Chromosome Location chr2:190165993-190165994
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190159800-190170800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
2 chr2:190160000-190170400 Enhancers Primary T killer naive cells fromperipheralblood blood
3 chr2:190160000-190171000 Enhancers Primary T helper cells fromperipheralblood blood
4 chr2:190160200-190171200 Enhancers Primary T killer memory cells from peripheral blood blood
5 chr2:190162400-190166000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
6 chr2:190162600-190171600 Enhancers Primary T cells from cord blood blood
7 chr2:190163000-190171800 Enhancers Primary T helper naive cells fromperipheralblood blood
8 chr2:190163400-190167000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr2:190163400-190169200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr2:190163400-190170800 Weak transcription Placenta Amnion Placenta Amnion
11 chr2:190163600-190166800 Weak transcription HMEC breast
12 chr2:190163600-190166800 Weak transcription NHEK skin
13 chr2:190163600-190167000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr2:190163600-190167400 Weak transcription NH-A brain
15 chr2:190163600-190169200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr2:190163600-190170200 Weak transcription NHDF-Ad bronchial
17 chr2:190165200-190166000 Enhancers Primary Natural Killer cells fromperipheralblood blood
18 chr2:190165200-190166000 Enhancers Fetal Thymus thymus
19 chr2:190165200-190166000 Enhancers Thymus Thymus
20 chr2:190165200-190166400 Enhancers Primary T cells fromperipheralblood blood
21 chr2:190165200-190166400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
22 chr2:190165200-190169400 Enhancers Primary T helper 17 cells PMA-I stimulated --
23 chr2:190165400-190166600 Enhancers Primary T regulatory cells fromperipheralblood blood
24 chr2:190165800-190166200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
25 chr2:190165800-190168000 Enhancers Dnd41 blood
26 chr2:190165800-190171200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
27 chr2:190165800-190171400 Enhancers Primary T helper naive cells from peripheral blood blood

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Last update: Aug 31, 2015