The 2.0 version of rSNPBase

Variant report

Variant rs57525746
Chromosome Location chr2:189992142-189992143
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:189962400-189995200 Weak transcription Aorta Aorta
2 chr2:189968600-190012000 Weak transcription Fetal Muscle Trunk muscle
3 chr2:189974800-190007600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr2:189981000-189993400 Weak transcription Ovary ovary
5 chr2:189981200-189992800 Weak transcription NH-A brain
6 chr2:189981200-189998000 Weak transcription Fetal Muscle Leg muscle
7 chr2:189981400-189992800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr2:189981400-190014800 Weak transcription Fetal Stomach stomach
9 chr2:189982400-190005800 Weak transcription Fetal Kidney kidney
10 chr2:189982600-189992600 Weak transcription NHLF lung
11 chr2:189984000-190016800 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr2:189984200-189992600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr2:189985400-190000200 Weak transcription Fetal Lung lung
14 chr2:189985600-189992600 Weak transcription Rectal Smooth Muscle rectum
15 chr2:189986000-190008800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr2:189988400-189993400 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr2:189990400-189992600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr2:189991200-189992800 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr2:189991400-189992600 Genic enhancers NHDF-Ad bronchial
20 chr2:189991400-189992800 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr2:189991400-189993000 Genic enhancers Osteobl bone
22 chr2:189991400-189993200 Enhancers Colon Smooth Muscle Colon
23 chr2:189991400-189993200 Genic enhancers HSMM muscle
24 chr2:189991600-189992200 Enhancers HUES48 Cell Line embryonic stem cell
25 chr2:189991600-189992800 Weak transcription A549 lung
26 chr2:189991600-189993200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr2:189991800-189992200 Strong transcription Muscle Satellite Cultured Cells --
28 chr2:189991800-189994600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr2:189991800-189997000 Enhancers HSMMtube muscle
30 chr2:189992000-189992200 Enhancers Adipose Nuclei Adipose
31 chr2:189992000-189992800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr2:189992000-189993000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015