The 2.0 version of rSNPBase

Variant report

Variant rs73982004
Chromosome Location chr2:190126354-190126355
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190119600-190126400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr2:190119800-190127800 Weak transcription Aorta Aorta
3 chr2:190123200-190132200 Weak transcription Pancreas Pancrea
4 chr2:190123600-190129600 Weak transcription Psoas Muscle Psoas
5 chr2:190124600-190126600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
6 chr2:190125000-190126600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr2:190125000-190126600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
8 chr2:190125000-190126600 Enhancers NH-A brain
9 chr2:190125000-190126600 Enhancers NHDF-Ad bronchial
10 chr2:190125000-190126800 Enhancers Osteobl bone
11 chr2:190125000-190127200 Enhancers A549 lung
12 chr2:190125200-190126600 Enhancers HUVEC blood vessel
13 chr2:190125200-190126800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr2:190125400-190126400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr2:190125400-190127800 Weak transcription Fetal Muscle Leg muscle
16 chr2:190125600-190126600 Enhancers Primary T cells from cord blood blood
17 chr2:190125800-190127000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
18 chr2:190125800-190127200 Enhancers Primary T helper 17 cells PMA-I stimulated --
19 chr2:190126000-190126400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr2:190126000-190126400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr2:190126000-190126400 Enhancers Primary T helper naive cells from peripheral blood blood
22 chr2:190126000-190126600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
23 chr2:190126000-190126600 Enhancers Primary T helper cells PMA-I stimulated --
24 chr2:190126000-190126600 Enhancers Primary T helper cells fromperipheralblood blood
25 chr2:190126000-190126600 Enhancers Primary T killer naive cells fromperipheralblood blood
26 chr2:190126000-190126600 Enhancers Rectal Smooth Muscle rectum
27 chr2:190126000-190126600 Enhancers Hela-S3 cervix
28 chr2:190126000-190126600 Enhancers HMEC breast
29 chr2:190126000-190126600 Enhancers HSMM muscle
30 chr2:190126000-190127000 Enhancers NHLF lung
31 chr2:190126200-190126400 Enhancers ES-I3 Cell Line embryonic stem cell
32 chr2:190126200-190126400 Enhancers H9 Cell Line embryonic stem cell
33 chr2:190126200-190126400 Enhancers Muscle Satellite Cultured Cells --
34 chr2:190126200-190126600 Enhancers ES-WA7 Cell Line embryonic stem cell
35 chr2:190126200-190126600 Enhancers H1 Cell Line embryonic stem cell
36 chr2:190126200-190126600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr2:190126200-190126600 Enhancers Primary T helper naive cells fromperipheralblood blood
38 chr2:190126200-190126600 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
39 chr2:190126200-190126600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
40 chr2:190126200-190126600 Enhancers Small Intestine intestine
41 chr2:190126200-190126600 Enhancers Stomach Mucosa stomach
42 chr2:190126200-190126600 Enhancers NHEK skin
43 chr2:190126200-190127200 Enhancers Fetal Lung lung

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Last update: Aug 31, 2015