The 2.0 version of rSNPBase

Variant report

Variant rs73980188
Chromosome Location chr2:190085810-190085811
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190076000-190087200 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr2:190076000-190096800 Weak transcription Aorta Aorta
3 chr2:190077000-190086000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr2:190077000-190086400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr2:190077000-190086600 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr2:190077000-190086600 Weak transcription Fetal Stomach stomach
7 chr2:190078400-190087800 Weak transcription Colon Smooth Muscle Colon
8 chr2:190078600-190086000 Weak transcription NHDF-Ad bronchial
9 chr2:190078600-190086800 Weak transcription NHLF lung
10 chr2:190082600-190086000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr2:190082600-190086800 Weak transcription HSMMtube muscle
12 chr2:190082800-190086200 Weak transcription Placenta Amnion Placenta Amnion
13 chr2:190082800-190087200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr2:190082800-190087200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr2:190082800-190087200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr2:190082800-190087200 Weak transcription Fetal Muscle Leg muscle
17 chr2:190083200-190086800 Weak transcription NH-A brain
18 chr2:190083400-190086200 Weak transcription HSMM muscle
19 chr2:190083600-190087200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr2:190083600-190087400 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr2:190084000-190087200 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr2:190084000-190087200 Weak transcription HUES6 Cell Line embryonic stem cell
23 chr2:190084200-190087200 Weak transcription Pancreas Pancrea
24 chr2:190084800-190088600 Enhancers Hela-S3 cervix
25 chr2:190085600-190087000 Flanking Active TSS A549 lung
26 chr2:190085800-190086000 Enhancers Rectal Mucosa Donor 31 rectum
27 chr2:190085800-190086400 Enhancers Muscle Satellite Cultured Cells --
28 chr2:190085800-190087200 Enhancers HUVEC blood vessel
29 chr2:190085800-190087600 Enhancers HMEC breast
30 chr2:190085800-190087600 Enhancers NHEK skin

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Last update: Aug 31, 2015