The 2.0 version of rSNPBase

Variant report

Variant rs60056080
Chromosome Location chr2:190163583-190163584
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190159800-190170800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
2 chr2:190160000-190165800 Enhancers Primary T helper cells PMA-I stimulated --
3 chr2:190160000-190170400 Enhancers Primary T killer naive cells fromperipheralblood blood
4 chr2:190160000-190171000 Enhancers Primary T helper cells fromperipheralblood blood
5 chr2:190160200-190171200 Enhancers Primary T killer memory cells from peripheral blood blood
6 chr2:190160400-190165200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
7 chr2:190160400-190165200 Enhancers Dnd41 blood
8 chr2:190161000-190165400 Enhancers Primary T helper naive cells from peripheral blood blood
9 chr2:190161400-190163600 Enhancers NH-A brain
10 chr2:190161600-190163600 Enhancers HSMM muscle
11 chr2:190161600-190163800 Enhancers Muscle Satellite Cultured Cells --
12 chr2:190162000-190163600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr2:190162200-190163600 Enhancers NHEK skin
14 chr2:190162400-190163600 Enhancers HMEC breast
15 chr2:190162400-190163600 Enhancers HSMMtube muscle
16 chr2:190162400-190164200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
17 chr2:190162400-190166000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
18 chr2:190162600-190163600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr2:190162600-190163600 Enhancers Cortex derived primary cultured neurospheres brain
20 chr2:190162600-190163600 Enhancers NHDF-Ad bronchial
21 chr2:190162600-190163600 Enhancers NHLF lung
22 chr2:190162600-190164000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr2:190162600-190171600 Enhancers Primary T cells from cord blood blood
24 chr2:190162800-190163600 Enhancers Primary T helper 17 cells PMA-I stimulated --
25 chr2:190162800-190163600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
26 chr2:190162800-190163600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
27 chr2:190162800-190163600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr2:190163000-190163600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr2:190163000-190171800 Enhancers Primary T helper naive cells fromperipheralblood blood
30 chr2:190163200-190165200 Weak transcription Thymus Thymus
31 chr2:190163200-190165400 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr2:190163400-190163800 Enhancers Osteobl bone
33 chr2:190163400-190165200 Weak transcription Primary T cells fromperipheralblood blood
34 chr2:190163400-190165200 Weak transcription Fetal Thymus thymus
35 chr2:190163400-190167000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr2:190163400-190169200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr2:190163400-190170800 Weak transcription Placenta Amnion Placenta Amnion

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Last update: Aug 31, 2015