Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1322948	0.84[EUR][1000 genomes]
rs1322953	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1343612	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1407688	0.82[EUR][1000 genomes]
rs1407689	0.82[EUR][1000 genomes]
rs1923772	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1951724	0.82[EUR][1000 genomes]
rs2004422	0.85[EUR][1000 genomes]
rs2181389	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2759674	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2759694	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2759698	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2759700	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2806937	0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2806940	0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2806965	0.85[EUR][1000 genomes]
rs2806968	0.81[EUR][1000 genomes]
rs2806982	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2806985	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2806994	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs5008125	0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832613	chr13:53524319-53687188	Enhancers Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1050969	chr13:53665927-54064861	Bivalent Enhancer Enhancers Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:53675400-53680000	Weak transcription	Pancreas	Pancrea
2	chr13:53679400-53680800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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