Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:56188195..56189971-chr3:56191874..56194144,2	K562	blood:

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs11712407	0.83[EUR][1000 genomes]
rs11712770	0.80[EUR][1000 genomes]
rs11716452	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11917679	0.83[EUR][1000 genomes]
rs12488385	0.86[EUR][1000 genomes]
rs12490423	0.86[EUR][1000 genomes]
rs12636541	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13065094	0.86[EUR][1000 genomes]
rs13097517	0.82[EUR][1000 genomes]
rs13100274	0.83[EUR][1000 genomes]
rs1352013	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1376980	0.83[EUR][1000 genomes]
rs1376983	0.82[EUR][1000 genomes]
rs1452209	0.88[EUR][1000 genomes]
rs1452210	0.86[EUR][1000 genomes]
rs1485677	0.86[EUR][1000 genomes]
rs1485679	0.94[EUR][1000 genomes]
rs1947347	0.85[EUR][1000 genomes]
rs2316475	0.83[EUR][1000 genomes]
rs2316476	0.83[EUR][1000 genomes]
rs2316861	0.93[EUR][1000 genomes]
rs28823346	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4974185	0.94[EUR][1000 genomes]
rs4974186	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6445771	0.81[EUR][1000 genomes]
rs6445777	0.94[EUR][1000 genomes]
rs6764950	0.86[EUR][1000 genomes]
rs6782312	0.85[EUR][1000 genomes]
rs7633985	0.83[EUR][1000 genomes]
rs7636668	0.86[EUR][1000 genomes]
rs7649615	0.89[EUR][1000 genomes]
rs7653658	0.86[EUR][1000 genomes]
rs7653768	0.85[EUR][1000 genomes]
rs9311598	0.85[CHB][hapmap];0.80[JPT][hapmap];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9311599	0.82[EUR][1000 genomes]
rs9880047	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1009709	chr3:56000827-56294945	Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:56192400-56204200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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