Variant report

Variant	rs1414639
Chromosome Location	chr10:117326544-117326545
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 65 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:65)

rs_ID	r²[population]
rs10787577	0.96[CEU][hapmap]
rs10885726	0.84[EUR][1000 genomes]
rs10885727	0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10885736	0.95[CEU][hapmap]
rs10885745	0.92[CEU][hapmap]
rs11197267	0.92[CEU][hapmap]
rs11197281	0.92[CEU][hapmap]
rs11197283	0.92[CEU][hapmap]
rs11197292	0.91[CEU][hapmap]
rs11197297	0.92[CEU][hapmap]
rs11197301	0.83[YRI][hapmap];0.83[AFR][1000 genomes]
rs11599485	0.92[CEU][hapmap];0.84[EUR][1000 genomes]
rs12252303	0.96[CEU][hapmap]
rs12360040	0.92[CEU][hapmap]
rs12765024	0.86[YRI][hapmap]
rs1328011	0.92[CEU][hapmap]
rs1336105	0.92[CEU][hapmap]
rs1336107	0.96[CEU][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1336111	0.92[CEU][hapmap]
rs1336114	0.92[CEU][hapmap];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1336115	0.96[CEU][hapmap];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1336118	0.92[CEU][hapmap];0.85[EUR][1000 genomes]
rs1414633	0.92[CEU][hapmap];0.90[YRI][hapmap]
rs1414635	0.96[CEU][hapmap]
rs1414640	0.92[CEU][hapmap];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1572396	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1572397	0.92[CEU][hapmap]
rs1572398	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1572399	1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap]
rs1572400	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap]
rs1572402	0.92[CEU][hapmap];0.88[EUR][1000 genomes]
rs1572403	0.91[CEU][hapmap];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1932581	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs1932582	0.96[CEU][hapmap]
rs2065824	0.92[CEU][hapmap];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2065827	0.92[CEU][hapmap]
rs2209850	0.96[CEU][hapmap]
rs2225799	0.92[CEU][hapmap]
rs2245045	0.92[CEU][hapmap]
rs2246089	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2769374	0.91[CEU][hapmap];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2769379	0.92[CEU][hapmap]
rs2769383	0.92[CEU][hapmap]
rs2769407	0.96[CEU][hapmap]
rs2784801	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs2784803	0.92[CEU][hapmap]
rs2784810	0.92[CEU][hapmap];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2804145	0.92[CEU][hapmap]
rs2804176	0.84[CEU][hapmap]
rs2804194	0.91[CEU][hapmap]
rs2804235	0.96[CEU][hapmap]
rs2804246	0.92[CEU][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4306223	0.92[CEU][hapmap]
rs6585335	0.84[EUR][1000 genomes]
rs6585337	0.92[CEU][hapmap];0.85[EUR][1000 genomes]
rs7073293	0.84[EUR][1000 genomes]
rs7075401	0.92[CEU][hapmap];0.84[EUR][1000 genomes]
rs7078828	0.96[CEU][hapmap]
rs7085497	0.92[CEU][hapmap]
rs7086325	0.92[CEU][hapmap]
rs7088622	0.88[CEU][hapmap];0.82[EUR][1000 genomes]
rs7098660	0.96[CEU][hapmap]
rs7895853	0.96[CEU][hapmap];0.84[EUR][1000 genomes]
rs7899493	0.92[CEU][hapmap]
rs7906146	0.96[CEU][hapmap]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117326000-117326600	Enhancers	Pancreatic Islets	Pancreatic Islet
2	chr10:117326000-117326800	Enhancers	HepG2	liver

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