Variant report

Variant	rs7088622
Chromosome Location	chr10:117257455-117257456
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 65 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:65)

rs_ID	r²[population]
rs10787574	0.82[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs10787577	0.96[CEU][hapmap]
rs10885726	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10885727	0.81[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs10885736	0.95[CEU][hapmap]
rs10885745	0.96[CEU][hapmap]
rs11197267	0.96[CEU][hapmap]
rs11197281	0.96[CEU][hapmap]
rs11197283	0.96[CEU][hapmap]
rs11197292	0.95[CEU][hapmap]
rs11197297	0.96[CEU][hapmap]
rs11599485	0.96[CEU][hapmap];0.97[AFR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12252303	0.96[CEU][hapmap]
rs12360040	0.96[CEU][hapmap]
rs1328011	0.96[CEU][hapmap]
rs1336105	0.96[CEU][hapmap]
rs1336107	0.96[CEU][hapmap];0.90[EUR][1000 genomes]
rs1336111	0.96[CEU][hapmap]
rs1336114	0.96[CEU][hapmap];0.90[EUR][1000 genomes]
rs1336115	0.96[CEU][hapmap];0.90[EUR][1000 genomes]
rs1336118	0.96[CEU][hapmap];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1414633	0.96[CEU][hapmap]
rs1414635	0.96[CEU][hapmap]
rs1414639	0.88[CEU][hapmap];0.82[EUR][1000 genomes]
rs1414640	0.96[CEU][hapmap];0.90[EUR][1000 genomes]
rs1572396	0.91[CEU][hapmap]
rs1572397	0.96[CEU][hapmap]
rs1572398	0.91[CEU][hapmap]
rs1572399	0.88[CEU][hapmap]
rs1572400	0.91[CEU][hapmap]
rs1572402	0.96[CEU][hapmap];0.92[EUR][1000 genomes]
rs1572403	0.95[CEU][hapmap];0.91[EUR][1000 genomes]
rs1932581	0.88[CEU][hapmap]
rs1932582	0.96[CEU][hapmap]
rs2065824	0.96[CEU][hapmap];0.90[EUR][1000 genomes]
rs2065827	0.96[CEU][hapmap]
rs2209850	0.96[CEU][hapmap]
rs2225799	0.96[CEU][hapmap]
rs2245045	0.96[CEU][hapmap]
rs2246089	0.89[EUR][1000 genomes]
rs2769374	0.95[CEU][hapmap];0.90[EUR][1000 genomes]
rs2769379	0.96[CEU][hapmap]
rs2769383	0.96[CEU][hapmap]
rs2769407	0.96[CEU][hapmap]
rs2784801	0.96[CEU][hapmap]
rs2784803	0.96[CEU][hapmap]
rs2784810	0.96[CEU][hapmap];0.90[EUR][1000 genomes]
rs2804145	0.91[CEU][hapmap]
rs2804176	0.83[CEU][hapmap]
rs2804194	0.95[CEU][hapmap]
rs2804235	0.96[CEU][hapmap]
rs2804246	0.96[CEU][hapmap];0.90[EUR][1000 genomes]
rs4306223	0.96[CEU][hapmap]
rs6585335	0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6585337	0.96[CEU][hapmap];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7073293	0.96[EUR][1000 genomes]
rs7075401	0.96[CEU][hapmap];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7078828	0.96[CEU][hapmap]
rs7085497	0.96[CEU][hapmap]
rs7086325	0.96[CEU][hapmap]
rs7093703	0.87[AFR][1000 genomes]
rs7098660	0.96[CEU][hapmap]
rs7895853	0.96[CEU][hapmap];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7899493	0.96[CEU][hapmap]
rs7906146	0.96[CEU][hapmap]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117251600-117258800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr10:117257400-117258600	Weak transcription	Aorta	Aorta

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