Variant report

Variant	rs142058
Chromosome Location	chr16:64766943-64766944
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr16:64766894-64767082	HepG2	liver:	n/a	chr16:64767037-64767048

Variant related genes	Relation type
ENSG00000260187	TF binding region
ENSG00000259859	TF binding region

Extended variants
information (count: 73 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:73)

rs_ID	r²[population]
rs1024480	1.00[ASN][1000 genomes]
rs10459802	1.00[ASN][1000 genomes]
rs11075548	1.00[ASN][1000 genomes]
rs121676	1.00[ASN][1000 genomes]
rs1423993	1.00[ASN][1000 genomes]
rs17410049	1.00[ASN][1000 genomes]
rs17410111	1.00[ASN][1000 genomes]
rs17487617	1.00[ASN][1000 genomes]
rs17487665	1.00[ASN][1000 genomes]
rs17495513	1.00[ASN][1000 genomes]
rs189130	1.00[ASN][1000 genomes]
rs2107371	1.00[ASN][1000 genomes]
rs2107372	1.00[ASN][1000 genomes]
rs2214541	1.00[ASN][1000 genomes]
rs231038	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231056	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231057	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231058	0.82[CEU][hapmap];1.00[CHB][hapmap];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231059	0.82[CEU][hapmap];1.00[CHB][hapmap];0.93[GIH][hapmap];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231060	0.82[CEU][hapmap];1.00[CHB][hapmap];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231062	0.82[CEU][hapmap];1.00[CHB][hapmap];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231063	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231064	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231065	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231066	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231067	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231068	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231070	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231071	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231072	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231073	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231074	0.82[CEU][hapmap];1.00[CHB][hapmap];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231075	1.00[ASN][1000 genomes]
rs231079	1.00[ASN][1000 genomes]
rs231080	1.00[ASN][1000 genomes]
rs231081	1.00[ASN][1000 genomes]
rs231082	1.00[ASN][1000 genomes]
rs231083	1.00[ASN][1000 genomes]
rs231085	1.00[ASN][1000 genomes]
rs231086	1.00[ASN][1000 genomes]
rs231087	1.00[ASN][1000 genomes]
rs231088	1.00[ASN][1000 genomes]
rs231090	1.00[ASN][1000 genomes]
rs231092	1.00[ASN][1000 genomes]
rs231094	1.00[ASN][1000 genomes]
rs231095	1.00[ASN][1000 genomes]
rs231096	1.00[ASN][1000 genomes]
rs231098	1.00[ASN][1000 genomes]
rs231099	1.00[ASN][1000 genomes]
rs231100	1.00[ASN][1000 genomes]
rs231101	1.00[ASN][1000 genomes]
rs231102	1.00[ASN][1000 genomes]
rs231103	1.00[ASN][1000 genomes]
rs231105	1.00[ASN][1000 genomes]
rs231107	1.00[ASN][1000 genomes]
rs231108	1.00[ASN][1000 genomes]
rs231109	1.00[ASN][1000 genomes]
rs231110	1.00[ASN][1000 genomes]
rs231117	1.00[ASN][1000 genomes]
rs231120	1.00[ASN][1000 genomes]
rs231122	1.00[ASN][1000 genomes]
rs373148	1.00[ASN][1000 genomes]
rs428500	1.00[ASN][1000 genomes]
rs4967865	1.00[ASN][1000 genomes]
rs57941915	1.00[ASN][1000 genomes]
rs62040425	1.00[ASN][1000 genomes]
rs62041811	1.00[ASN][1000 genomes]
rs62041812	1.00[ASN][1000 genomes]
rs62044496	1.00[ASN][1000 genomes]
rs62044497	1.00[ASN][1000 genomes]
rs7184774	1.00[ASN][1000 genomes]
rs7191507	1.00[ASN][1000 genomes]
rs72788800	1.00[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:64764600-64767200	Weak transcription	Muscle Satellite Cultured Cells	--

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