Variant report

Variant	rs17495513
Chromosome Location	chr16:64854788-64854789
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 76 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:75)

rs_ID	r²[population]
rs1024480	1.00[ASN][1000 genomes]
rs10459802	1.00[ASN][1000 genomes]
rs11075548	1.00[ASN][1000 genomes]
rs121676	1.00[ASN][1000 genomes]
rs142058	0.82[CEU][hapmap];1.00[ASN][1000 genomes]
rs1423993	1.00[ASN][1000 genomes]
rs17410049	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17410111	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17487617	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17487665	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs189130	1.00[ASN][1000 genomes]
rs2107371	1.00[ASN][1000 genomes]
rs2107372	1.00[ASN][1000 genomes]
rs2214541	1.00[ASN][1000 genomes]
rs231038	1.00[ASN][1000 genomes]
rs231056	1.00[ASN][1000 genomes]
rs231057	1.00[ASN][1000 genomes]
rs231058	1.00[CEU][hapmap];1.00[ASN][1000 genomes]
rs231059	1.00[CEU][hapmap];1.00[ASN][1000 genomes]
rs231060	1.00[CEU][hapmap];1.00[ASN][1000 genomes]
rs231062	1.00[CEU][hapmap];1.00[ASN][1000 genomes]
rs231063	1.00[ASN][1000 genomes]
rs231064	1.00[ASN][1000 genomes]
rs231065	1.00[ASN][1000 genomes]
rs231066	1.00[CEU][hapmap];1.00[ASN][1000 genomes]
rs231067	1.00[ASN][1000 genomes]
rs231068	1.00[ASN][1000 genomes]
rs231070	1.00[CEU][hapmap];1.00[ASN][1000 genomes]
rs231071	1.00[ASN][1000 genomes]
rs231072	1.00[ASN][1000 genomes]
rs231073	1.00[CEU][hapmap];1.00[ASN][1000 genomes]
rs231074	1.00[CEU][hapmap];1.00[ASN][1000 genomes]
rs231075	1.00[ASN][1000 genomes]
rs231079	1.00[ASN][1000 genomes]
rs231080	1.00[ASN][1000 genomes]
rs231081	1.00[ASN][1000 genomes]
rs231082	1.00[ASN][1000 genomes]
rs231083	1.00[ASN][1000 genomes]
rs231085	1.00[ASN][1000 genomes]
rs231086	1.00[ASN][1000 genomes]
rs231087	1.00[ASN][1000 genomes]
rs231088	1.00[ASN][1000 genomes]
rs231090	1.00[ASN][1000 genomes]
rs231092	1.00[ASN][1000 genomes]
rs231094	1.00[ASN][1000 genomes]
rs231095	1.00[ASN][1000 genomes]
rs231096	1.00[ASN][1000 genomes]
rs231098	1.00[ASN][1000 genomes]
rs231099	1.00[ASN][1000 genomes]
rs231100	1.00[ASN][1000 genomes]
rs231101	1.00[ASN][1000 genomes]
rs231102	1.00[ASN][1000 genomes]
rs231103	1.00[ASN][1000 genomes]
rs231105	1.00[ASN][1000 genomes]
rs231107	1.00[ASN][1000 genomes]
rs231108	1.00[ASN][1000 genomes]
rs231109	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231110	1.00[ASN][1000 genomes]
rs231117	1.00[ASN][1000 genomes]
rs231120	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231122	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs373148	1.00[ASN][1000 genomes]
rs428500	1.00[ASN][1000 genomes]
rs4967865	1.00[ASN][1000 genomes]
rs57941915	1.00[ASN][1000 genomes]
rs62040425	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62041811	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62041812	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62044496	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62044497	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62044499	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7184774	1.00[ASN][1000 genomes]
rs7191507	0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72788800	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72790807	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv572899	chr16:64814244-64870659	Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:64854200-64855200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr16:64854400-64854800	Enhancers	Brain Substantia Nigra	brain

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