Variant report

Variant	rs231120
Chromosome Location	chr16:64804297-64804298
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 74 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:74)

rs_ID	r²[population]
rs1024480	1.00[ASN][1000 genomes]
rs10459802	1.00[ASN][1000 genomes]
rs11075548	1.00[ASN][1000 genomes]
rs121676	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs142058	1.00[ASN][1000 genomes]
rs1423993	1.00[ASN][1000 genomes]
rs17410049	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17410111	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17487617	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17487665	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17495513	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs189130	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2107371	1.00[ASN][1000 genomes]
rs2107372	1.00[ASN][1000 genomes]
rs2214541	1.00[ASN][1000 genomes]
rs231038	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231056	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231057	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231058	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231059	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231060	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231062	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231063	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231064	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231065	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231066	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231067	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231068	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231070	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231071	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231072	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231073	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231074	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231075	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231079	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231080	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231081	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231082	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231083	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231085	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231086	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231087	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231088	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231090	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231092	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231093	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs231094	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231095	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231096	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231098	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231099	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231100	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231101	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231102	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231103	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231105	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231107	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231108	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231109	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231110	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231117	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs231122	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs373148	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs428500	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4967865	1.00[ASN][1000 genomes]
rs57941915	1.00[ASN][1000 genomes]
rs62040425	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62041811	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62041812	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62044496	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62044497	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7184774	1.00[ASN][1000 genomes]
rs7191507	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72788800	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:64803200-64804400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr16:64803600-64807400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr16:64803800-64805800	Weak transcription	Osteobl	bone

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links