The 2.0 version of rSNPBase

Variant report

Variant rs1468876
Chromosome Location chr12:12592134-12592135
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:12582600-12595000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr12:12582600-12599400 Weak transcription HUES48 Cell Line embryonic stem cell
3 chr12:12582800-12592600 Weak transcription NH-A brain
4 chr12:12582800-12596400 Weak transcription Spleen Spleen
5 chr12:12583000-12594000 Weak transcription HSMMtube muscle
6 chr12:12584000-12598600 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr12:12584200-12592200 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr12:12584200-12592800 Weak transcription Primary T helper naive cells fromperipheralblood blood
9 chr12:12584200-12593200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr12:12585400-12593200 Weak transcription Small Intestine intestine
11 chr12:12585600-12595200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr12:12585800-12595400 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr12:12586000-12593200 Weak transcription Liver Liver
14 chr12:12586000-12594200 Weak transcription Hela-S3 cervix
15 chr12:12586000-12595000 Weak transcription Adipose Nuclei Adipose
16 chr12:12586200-12595000 Weak transcription Colon Smooth Muscle Colon
17 chr12:12586200-12595400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr12:12586600-12594200 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr12:12586800-12594000 Weak transcription Right Ventricle heart
20 chr12:12587000-12592200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr12:12587000-12592600 Weak transcription Stomach Mucosa stomach
22 chr12:12587000-12593800 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr12:12587000-12594800 Weak transcription Aorta Aorta
24 chr12:12587000-12594800 Weak transcription Esophagus oesophagus
25 chr12:12587000-12594800 Weak transcription Placenta Placenta
26 chr12:12587200-12593200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr12:12587200-12593800 Weak transcription Fetal Intestine Small intestine
28 chr12:12587200-12594000 Weak transcription Brain Angular Gyrus brain
29 chr12:12587200-12594000 Weak transcription Lung lung
30 chr12:12587200-12594000 Weak transcription Psoas Muscle Psoas
31 chr12:12587200-12594200 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr12:12587200-12595200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr12:12587200-12596400 Weak transcription Fetal Muscle Trunk muscle
34 chr12:12587200-12596400 Weak transcription Gastric stomach
35 chr12:12587400-12592200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr12:12587400-12592600 Weak transcription Thymus Thymus
37 chr12:12587400-12593200 Weak transcription Fetal Muscle Leg muscle
38 chr12:12587400-12593800 Weak transcription Pancreas Pancrea
39 chr12:12587400-12594000 Weak transcription Brain Anterior Caudate brain
40 chr12:12587400-12594200 Weak transcription Brain Cingulate Gyrus brain
41 chr12:12587400-12594800 Weak transcription NHLF lung
42 chr12:12587400-12595000 Weak transcription NHDF-Ad bronchial
43 chr12:12587400-12595400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr12:12587400-12595400 Weak transcription Stomach Smooth Muscle stomach
45 chr12:12587400-12595800 Weak transcription Fetal Stomach stomach
46 chr12:12587400-12600200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr12:12587400-12600200 Weak transcription Ovary ovary
48 chr12:12587600-12592600 Weak transcription A549 lung
49 chr12:12587800-12593800 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr12:12588000-12594200 Weak transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015