The 2.0 version of rSNPBase

Variant report

Variant rs7969984
Chromosome Location chr12:12579212-12579213
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:12558000-12586000 Weak transcription Pancreas Pancrea
2 chr12:12565200-12585000 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr12:12572600-12588400 Weak transcription Primary T cells from cord blood blood
4 chr12:12577400-12582200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr12:12577400-12582600 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr12:12577600-12580600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr12:12577600-12583800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr12:12577800-12580000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr12:12577800-12581800 Weak transcription Primary T cells fromperipheralblood blood
10 chr12:12577800-12584000 Weak transcription Primary T helper naive cells fromperipheralblood blood
11 chr12:12578000-12579400 Enhancers Psoas Muscle Psoas
12 chr12:12578000-12579400 Enhancers HUVEC blood vessel
13 chr12:12578000-12580000 Enhancers Aorta Aorta
14 chr12:12578200-12579400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr12:12578200-12579600 Enhancers Stomach Mucosa stomach
16 chr12:12578200-12588600 Weak transcription Primary B cells from cord blood blood
17 chr12:12578400-12579400 Enhancers Duodenum Smooth Muscle Duodenum
18 chr12:12578400-12586600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr12:12578400-12588200 Weak transcription Primary B cells from peripheral blood blood
20 chr12:12578600-12579400 Enhancers HepG2 liver
21 chr12:12578600-12580800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
22 chr12:12578800-12579400 Enhancers Fetal Lung lung
23 chr12:12578800-12581800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr12:12578800-12586200 Weak transcription Brain Hippocampus Middle brain
25 chr12:12578800-12589200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr12:12579000-12579600 Enhancers Fetal Intestine Large intestine
27 chr12:12579000-12580600 Weak transcription HMEC breast
28 chr12:12579000-12581000 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr12:12579000-12582000 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr12:12579000-12582400 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr12:12579000-12583400 Weak transcription NHLF lung
32 chr12:12579000-12583800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr12:12579200-12581800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr12:12579200-12582000 Weak transcription HSMMtube muscle
35 chr12:12579200-12582000 Weak transcription Osteobl bone
36 chr12:12579200-12582600 Weak transcription Primary T helper cells PMA-I stimulated --
37 chr12:12579200-12582600 Weak transcription HSMM muscle
38 chr12:12579200-12585200 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015