Variant report
| Variant | rs28853875 |
|---|---|
| Chromosome Location | chr12:12562075-12562076 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:12537200-12576000 | Weak transcription | Primary B cells from cord blood | blood |
| 2 | chr12:12541400-12562800 | Weak transcription | Psoas Muscle | Psoas |
| 3 | chr12:12552000-12569000 | Weak transcription | Hela-S3 | cervix |
| 4 | chr12:12557200-12572400 | Weak transcription | Primary T cells from cord blood | blood |
| 5 | chr12:12557800-12565000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 6 | chr12:12558000-12586000 | Weak transcription | Pancreas | Pancrea |
| 7 | chr12:12559200-12564800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 8 | chr12:12559400-12564800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 9 | chr12:12560200-12562200 | Weak transcription | Fetal Intestine Small | intestine |
| 10 | chr12:12560200-12564800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 11 | chr12:12560200-12564800 | Weak transcription | HepG2 | liver |
| 12 | chr12:12561000-12562200 | Enhancers | Primary neutrophils fromperipheralblood | blood |
| 13 | chr12:12561200-12562200 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 14 | chr12:12561600-12562200 | Enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
| 15 | chr12:12561600-12562400 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |
| 16 | chr12:12561600-12562600 | Weak transcription | Brain Substantia Nigra | brain |
| 17 | chr12:12562000-12564200 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 18 | chr12:12562000-12564800 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 19 | chr12:12562000-12565600 | Weak transcription | GM12878-XiMat | blood |
