The 2.0 version of rSNPBase

Variant report

Variant rs60253266
Chromosome Location chr12:12580264-12580265
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:12558000-12586000 Weak transcription Pancreas Pancrea
2 chr12:12565200-12585000 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr12:12572600-12588400 Weak transcription Primary T cells from cord blood blood
4 chr12:12577400-12582200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr12:12577400-12582600 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr12:12577600-12580600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr12:12577600-12583800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr12:12577800-12581800 Weak transcription Primary T cells fromperipheralblood blood
9 chr12:12577800-12584000 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr12:12578200-12588600 Weak transcription Primary B cells from cord blood blood
11 chr12:12578400-12586600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr12:12578400-12588200 Weak transcription Primary B cells from peripheral blood blood
13 chr12:12578600-12580800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr12:12578800-12581800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr12:12578800-12586200 Weak transcription Brain Hippocampus Middle brain
16 chr12:12578800-12589200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr12:12579000-12580600 Weak transcription HMEC breast
18 chr12:12579000-12581000 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr12:12579000-12582000 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr12:12579000-12582400 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr12:12579000-12583400 Weak transcription NHLF lung
22 chr12:12579000-12583800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr12:12579200-12581800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr12:12579200-12582000 Weak transcription HSMMtube muscle
25 chr12:12579200-12582000 Weak transcription Osteobl bone
26 chr12:12579200-12582600 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr12:12579200-12582600 Weak transcription HSMM muscle
28 chr12:12579200-12585200 Weak transcription Rectal Smooth Muscle rectum
29 chr12:12579400-12580400 Weak transcription HepG2 liver
30 chr12:12579400-12582000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr12:12579400-12582200 Weak transcription Fetal Lung lung
32 chr12:12579400-12585000 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr12:12579400-12587000 Weak transcription Psoas Muscle Psoas
34 chr12:12579600-12583800 Weak transcription Fetal Stomach stomach
35 chr12:12579600-12585200 Weak transcription Stomach Mucosa stomach
36 chr12:12579600-12586600 Weak transcription Fetal Intestine Large intestine
37 chr12:12580000-12580600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr12:12580000-12580600 Weak transcription Aorta Aorta
39 chr12:12580000-12582200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr12:12580000-12588600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr12:12580200-12583800 Weak transcription Primary T killer memory cells from peripheral blood blood

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Last update: Aug 31, 2015