Variant report

Variant	rs1475036
Chromosome Location	chr14:69188963-69188964
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:69186631..69190079-chr14:69260120..69263014,4	K562	blood:

Variant related genes	Relation type
ENSG00000185650	Chromatin interaction

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10145642	0.86[YRI][hapmap]
rs12147980	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17106169	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17106170	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17106182	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17106195	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];1.00[TSI][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56762713	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56888100	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56961567	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57414862	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57744629	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61387441	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61562519	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72625664	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8003773	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9646162	1.00[CHB][hapmap];0.82[JPT][hapmap];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69173600-69194200	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr14:69173600-69196400	Weak transcription	Right Ventricle	heart
3	chr14:69176600-69189400	Weak transcription	Pancreas	Pancrea
4	chr14:69181000-69191400	Weak transcription	Fetal Muscle Trunk	muscle
5	chr14:69181000-69195200	Weak transcription	Spleen	Spleen
6	chr14:69182000-69202600	Weak transcription	Placenta Amnion	Placenta Amnion
7	chr14:69182200-69191200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr14:69187000-69194200	Weak transcription	HUVEC	blood vessel
9	chr14:69187400-69189000	Weak transcription	Primary T helper cells fromperipheralblood	blood
10	chr14:69187400-69200000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
11	chr14:69187600-69189800	Weak transcription	Small Intestine	intestine
12	chr14:69187600-69192400	Enhancers	Fetal Intestine Small	intestine
13	chr14:69187800-69192600	Weak transcription	K562	blood
14	chr14:69187800-69199400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
15	chr14:69188400-69190400	Enhancers	HepG2	liver
16	chr14:69188400-69193000	Enhancers	Fetal Intestine Large	intestine
17	chr14:69188600-69189200	Enhancers	Liver	Liver
18	chr14:69188600-69190200	Enhancers	Skeletal Muscle Male	skeletal muscle
19	chr14:69188600-69191400	Enhancers	Duodenum Mucosa	Duodenum
20	chr14:69188600-69191800	Enhancers	Ovary	ovary
21	chr14:69188600-69194400	Weak transcription	Fetal Stomach	stomach

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