Variant report

Variant	rs61387441
Chromosome Location	chr14:69189512-69189513
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:69186631..69190079-chr14:69260120..69263014,4	K562	blood:
2	chr14:69189213..69193249-chr14:69249817..69253831,4	MCF-7	breast:
3	chr14:69182928..69185621-chr14:69189406..69191992,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000185650	Chromatin interaction

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs12147980	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1475036	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17106169	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17106170	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17106182	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17106195	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56762713	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56888100	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56961567	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57414862	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57744629	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61562519	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72625664	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8003773	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9646162	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69173600-69194200	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr14:69173600-69196400	Weak transcription	Right Ventricle	heart
3	chr14:69181000-69191400	Weak transcription	Fetal Muscle Trunk	muscle
4	chr14:69181000-69195200	Weak transcription	Spleen	Spleen
5	chr14:69182000-69202600	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr14:69182200-69191200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr14:69187000-69194200	Weak transcription	HUVEC	blood vessel
8	chr14:69187400-69200000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
9	chr14:69187600-69189800	Weak transcription	Small Intestine	intestine
10	chr14:69187600-69192400	Enhancers	Fetal Intestine Small	intestine
11	chr14:69187800-69192600	Weak transcription	K562	blood
12	chr14:69187800-69199400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
13	chr14:69188400-69190400	Enhancers	HepG2	liver
14	chr14:69188400-69193000	Enhancers	Fetal Intestine Large	intestine
15	chr14:69188600-69190200	Enhancers	Skeletal Muscle Male	skeletal muscle
16	chr14:69188600-69191400	Enhancers	Duodenum Mucosa	Duodenum
17	chr14:69188600-69191800	Enhancers	Ovary	ovary
18	chr14:69188600-69194400	Weak transcription	Fetal Stomach	stomach
19	chr14:69189000-69189800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
20	chr14:69189200-69190000	Enhancers	Fetal Heart	heart
21	chr14:69189200-69190800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
22	chr14:69189200-69191200	Enhancers	Fetal Kidney	kidney
23	chr14:69189400-69189800	Enhancers	Liver	Liver
24	chr14:69189400-69190000	Enhancers	Left Ventricle	heart
25	chr14:69189400-69190000	Enhancers	Pancreas	Pancrea

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