Variant report

Variant	rs1521777
Chromosome Location	chr8:106036779-106036780
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs2030476	1.00[ASN][1000 genomes]
rs2342483	1.00[ASN][1000 genomes]
rs28424250	1.00[ASN][1000 genomes]
rs285778	1.00[ASN][1000 genomes]
rs285784	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs285800	1.00[ASN][1000 genomes]
rs285808	1.00[ASN][1000 genomes]
rs285817	1.00[ASN][1000 genomes]
rs285818	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs285821	0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs285830	0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs285831	0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs285844	0.92[CEU][hapmap];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs285875	0.85[CEU][hapmap];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28700873	1.00[ASN][1000 genomes]
rs364605	1.00[ASN][1000 genomes]
rs367858	1.00[ASN][1000 genomes]
rs398324	1.00[ASN][1000 genomes]
rs72676195	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762763	chr8:105943295-106218634	Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv891253	chr8:105994885-106251476	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:106036000-106037200	Enhancers	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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