Variant report

Variant	rs1535612
Chromosome Location	chr6:56349700-56349701
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:36)
CpG islands
(count:0)
Chromatin interactive
region (count:2)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:36 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	FOSL2	chr6:56349340-56349930	SK-N-SH	brain:	n/a	n/a
2	ESR1	chr6:56349511-56349800	T-47D	breast:	n/a	n/a
3	CEBPB	chr6:56349588-56349843	HepG2	liver:	n/a	n/a
4	TCF12	chr6:56349327-56350156	SK-N-SH	brain:	n/a	n/a
5	ESR1	chr6:56349443-56349806	T-47D	breast:	n/a	n/a
6	JUND	chr6:56349348-56350019	SK-N-SH	brain:	n/a	n/a
7	FOS	chr6:56349675-56349751	MCF10A-Er-Src	breast:	n/a	n/a
8	EP300	chr6:56349398-56349931	SK-N-SH_RA	brain:	n/a	n/a
9	TCF7L2	chr6:56349514-56349754	Hela-S3	cervix:	n/a	n/a
10	EP300	chr6:56349372-56350009	ECC-1	luminal epithelium:	n/a	n/a
11	EP300	chr6:56349379-56350120	SK-N-SH_RA	brain:	n/a	n/a
12	GATA3	chr6:56349376-56349991	SK-N-SH	brain:	n/a	n/a
13	ESR1	chr6:56349514-56349770	T-47D	breast:	n/a	n/a
14	PBX3	chr6:56349361-56350072	SK-N-SH	brain:	n/a	n/a
15	TEAD4	chr6:56349424-56350017	SK-N-SH	brain:	n/a	n/a
16	CEBPB	chr6:56349531-56349895	IMR90	lung:	n/a	n/a
17	MAFK	chr6:56349407-56349701	HepG2	liver:	n/a	n/a
18	TEAD4	chr6:56349455-56349954	ECC-1	luminal epithelium:	n/a	n/a
19	FOS	chr6:56349536-56349759	MCF10A-Er-Src	breast:	n/a	n/a
20	GATA3	chr6:56349320-56350180	SK-N-SH	brain:	n/a	n/a
21	ESR1	chr6:56349412-56349901	ECC-1	luminal epithelium:	n/a	n/a
22	FOS	chr6:56349599-56349744	MCF10A-Er-Src	breast:	n/a	n/a
23	ESR1	chr6:56349497-56349806	ECC-1	luminal epithelium:	n/a	n/a
24	POLR2A	chr6:56349474-56349862	SK-N-SH	brain:	n/a	n/a
25	ESR1	chr6:56349366-56349932	ECC-1	luminal epithelium:	n/a	n/a
26	POLR2A	chr6:56349640-56349757	GM12878	blood:	n/a	n/a
27	TCF12	chr6:56349319-56350071	SK-N-SH	brain:	n/a	n/a
28	ESR1	chr6:56349318-56350054	ECC-1	luminal epithelium:	n/a	n/a
29	ESR1	chr6:56349303-56349895	ECC-1	luminal epithelium:	n/a	n/a
30	JUND	chr6:56349319-56350031	SK-N-SH	brain:	n/a	n/a
31	MAFK	chr6:56349360-56349730	IMR90	lung:	n/a	n/a
32	NFIC	chr6:56349344-56350029	SK-N-SH	brain:	n/a	n/a
33	MEF2A	chr6:56349447-56350023	SK-N-SH	brain:	n/a	n/a
34	EP300	chr6:56349444-56350131	SK-N-SH	brain:	n/a	n/a
35	RXRA	chr6:56349364-56350023	SK-N-SH	brain:	n/a	n/a
36	CEBPB	chr6:56349473-56349890	Hela-S3	cervix:	n/a	n/a

No data

(count:2 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:56340912..56343256-chr6:56347717..56349911,2	MCF-7	breast:
2	chr6:56338290..56340849-chr6:56348774..56350620,2	K562	blood:

No data

Variant related genes	Relation type
DST	TF binding region
ENSG00000151914	Chromatin interaction

Extended variants
information (count: 115 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:112)

rs_ID	r²[population]
rs11753813	0.93[ASW][hapmap];1.00[CEU][hapmap];0.93[CHB][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];0.85[YRI][hapmap];0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11756977	0.91[CEU][hapmap];0.89[GIH][hapmap];0.83[MEX][hapmap];0.80[TSI][hapmap]
rs11758339	1.00[CHB][hapmap];0.91[CHD][hapmap];0.93[GIH][hapmap];0.93[JPT][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap];0.93[ASN][1000 genomes]
rs11759493	0.87[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11961668	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12174955	0.94[CHB][hapmap];0.87[JPT][hapmap];0.89[ASN][1000 genomes]
rs12527139	0.85[ASN][1000 genomes]
rs13194746	0.81[EUR][1000 genomes]
rs13204556	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1359068	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1359070	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1535610	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1570492	0.95[ASN][1000 genomes]
rs16887974	0.81[EUR][1000 genomes]
rs17825773	0.89[MEX][hapmap]
rs2273972	0.93[GIH][hapmap];0.90[TSI][hapmap];0.89[ASN][1000 genomes]
rs2273973	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2273974	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2397226	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2894837	0.88[CHB][hapmap];0.94[MEX][hapmap]
rs34954984	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35671304	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35926142	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3927453	0.84[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs4130060	0.87[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs4143827	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4143828	0.87[CEU][hapmap];0.87[CHB][hapmap];0.93[JPT][hapmap]
rs4236139	1.00[CEU][hapmap];1.00[GIH][hapmap];0.82[JPT][hapmap];0.88[MEX][hapmap];0.85[TSI][hapmap];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4236140	0.87[CEU][hapmap];0.95[GIH][hapmap];0.82[JPT][hapmap];0.94[MEX][hapmap];0.83[TSI][hapmap]
rs4236141	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4236142	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4236143	0.82[ASN][1000 genomes]
rs4236144	0.91[CEU][hapmap];0.87[CHB][hapmap];0.93[JPT][hapmap]
rs4236145	0.87[CEU][hapmap];0.87[CHB][hapmap];0.91[GIH][hapmap];0.93[JPT][hapmap];0.83[MEX][hapmap]
rs4283892	0.87[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4329120	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4331988	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4346846	1.00[CEU][hapmap];0.82[JPT][hapmap];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4454141	1.00[CEU][hapmap];0.98[GIH][hapmap];0.82[JPT][hapmap];0.94[MEX][hapmap];0.85[TSI][hapmap];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4466244	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4472350	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4473850	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4499917	0.87[CEU][hapmap];0.87[CHB][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.81[TSI][hapmap];0.86[ASN][1000 genomes]
rs4544910	0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs45486696	0.83[AFR][1000 genomes];0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4712132	0.87[CEU][hapmap];0.87[CHB][hapmap];0.89[GIH][hapmap];0.93[JPT][hapmap];0.83[MEX][hapmap]
rs4712133	0.91[CEU][hapmap];0.87[CHB][hapmap];0.93[GIH][hapmap];0.93[JPT][hapmap];0.83[MEX][hapmap]
rs4715625	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4715626	1.00[CEU][hapmap];1.00[GIH][hapmap];0.82[JPT][hapmap];0.94[MEX][hapmap];0.85[TSI][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4715627	1.00[CEU][hapmap];1.00[GIH][hapmap];0.82[JPT][hapmap];0.88[MEX][hapmap];0.85[TSI][hapmap];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4715628	1.00[CEU][hapmap];0.82[JPT][hapmap];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4715629	1.00[CEU][hapmap];0.93[GIH][hapmap];0.83[MEX][hapmap];0.83[EUR][1000 genomes]
rs4715630	0.87[CEU][hapmap];0.87[CHB][hapmap];0.89[GIH][hapmap];0.93[JPT][hapmap];0.88[MEX][hapmap];0.81[ASN][1000 genomes]
rs4715631	0.91[CEU][hapmap];0.93[GIH][hapmap];0.83[MEX][hapmap];0.80[TSI][hapmap];0.81[EUR][1000 genomes]
rs59101638	0.88[ASN][1000 genomes]
rs594008	0.83[GIH][hapmap]
rs6459161	0.91[CEU][hapmap];0.87[CHB][hapmap];0.93[GIH][hapmap];0.80[JPT][hapmap];1.00[MEX][hapmap];0.87[TSI][hapmap];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6459163	0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs656988	0.88[CHB][hapmap]
rs6904202	1.00[CEU][hapmap];1.00[GIH][hapmap];0.97[TSI][hapmap];0.88[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs6906792	1.00[CEU][hapmap];0.82[JPT][hapmap];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6907917	0.85[ASN][1000 genomes]
rs6911502	0.82[CHB][hapmap];0.89[GIH][hapmap];1.00[MEX][hapmap];0.83[TSI][hapmap]
rs6913572	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6914184	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6914325	0.80[ASN][1000 genomes]
rs6919608	0.86[CEU][hapmap];1.00[GIH][hapmap];0.85[TSI][hapmap];0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6922770	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs6927258	0.94[CHB][hapmap];0.87[JPT][hapmap];0.90[ASN][1000 genomes]
rs6928601	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6939305	0.82[JPT][hapmap]
rs721475	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72877350	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7741295	0.87[CEU][hapmap];0.87[CHB][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.83[TSI][hapmap];0.86[ASN][1000 genomes]
rs7743011	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7746753	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7755220	0.83[ASN][1000 genomes]
rs7755361	1.00[CEU][hapmap];0.82[JPT][hapmap];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7755573	0.82[ASN][1000 genomes]
rs7758054	0.85[ASN][1000 genomes]
rs7759875	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs7760640	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs7761281	0.87[CHB][hapmap];0.89[GIH][hapmap];0.93[JPT][hapmap];0.83[MEX][hapmap]
rs7762629	0.87[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs9296848	0.87[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9296849	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9296850	0.86[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs9349822	0.81[ASN][1000 genomes]
rs9349823	0.93[CHB][hapmap];0.86[JPT][hapmap];0.90[ASN][1000 genomes]
rs9349824	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9349825	0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9349826	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9349828	0.86[JPT][hapmap]
rs9357921	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9357922	0.87[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs9370531	0.93[ASN][1000 genomes]
rs9370533	0.95[CEU][hapmap];0.94[CHB][hapmap];0.87[JPT][hapmap]
rs9370534	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs9370535	0.87[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9382631	0.95[ASN][1000 genomes]
rs9382635	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9396211	0.81[ASN][1000 genomes]
rs9396213	0.86[CEU][hapmap];0.94[CHB][hapmap];0.98[GIH][hapmap];0.87[JPT][hapmap];1.00[MEX][hapmap];0.87[TSI][hapmap];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9396214	0.82[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9396215	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9396218	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9396220	0.91[CEU][hapmap]
rs9464389	0.88[ASN][1000 genomes]
rs9475709	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9475713	1.00[CEU][hapmap];1.00[GIH][hapmap];0.82[JPT][hapmap];0.83[MEX][hapmap];0.85[TSI][hapmap];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9475714	1.00[CEU][hapmap];1.00[GIH][hapmap];0.82[JPT][hapmap];0.81[MEX][hapmap];0.85[TSI][hapmap];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9475716	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv491933	chr6:56177722-57171010	Active TSS Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
2	nsv830666	chr6:56243743-56419599	Genic enhancers Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
3	nsv885912	chr6:56327849-56458836	Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:106 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:56308800-56373800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr6:56315000-56349800	Strong transcription	HSMM	muscle
3	chr6:56315600-56371000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr6:56327200-56351400	Weak transcription	Fetal Thymus	thymus
5	chr6:56328600-56362000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr6:56329200-56373800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
7	chr6:56330000-56351400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
8	chr6:56330000-56372400	Weak transcription	Lung	lung
9	chr6:56330200-56357400	Weak transcription	Esophagus	oesophagus
10	chr6:56333000-56350000	Strong transcription	HMEC	breast
11	chr6:56334400-56359400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr6:56337600-56350800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
13	chr6:56337600-56351400	Weak transcription	Aorta	Aorta
14	chr6:56337600-56351400	Weak transcription	Pancreas	Pancrea
15	chr6:56337600-56364600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
16	chr6:56337600-56376000	Weak transcription	Gastric	stomach
17	chr6:56339800-56354400	Strong transcription	Skeletal Muscle Female	skeletal muscle
18	chr6:56339800-56355800	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr6:56341600-56351400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
20	chr6:56341800-56407400	Weak transcription	Spleen	Spleen
21	chr6:56342400-56353200	Weak transcription	Primary hematopoietic stem cells	blood
22	chr6:56343200-56351400	Weak transcription	Brain Angular Gyrus	brain
23	chr6:56344200-56371600	Strong transcription	HUES48 Cell Line	embryonic stem cell
24	chr6:56344600-56351800	Weak transcription	A549	lung
25	chr6:56344600-56354200	Strong transcription	iPS-20b Cell Line	embryonic stem cell
26	chr6:56344800-56351400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
27	chr6:56344800-56352800	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
28	chr6:56344800-56354400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
29	chr6:56344800-56362000	Strong transcription	Fetal Lung	lung
30	chr6:56344800-56372200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
31	chr6:56345000-56351400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
32	chr6:56345000-56384200	Strong transcription	HUES64 Cell Line	embryonic stem cell
33	chr6:56345400-56350000	Weak transcription	Fetal Brain Female	brain
34	chr6:56345600-56356800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
35	chr6:56345800-56362000	Weak transcription	Colonic Mucosa	Colon
36	chr6:56346000-56372400	Weak transcription	Psoas Muscle	Psoas
37	chr6:56346200-56351200	Weak transcription	Ovary	ovary
38	chr6:56346400-56350400	Strong transcription	Fetal Brain Male	brain
39	chr6:56347000-56362000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
40	chr6:56347400-56351400	Weak transcription	Primary monocytes fromperipheralblood	blood
41	chr6:56347400-56351400	Weak transcription	Brain Germinal Matrix	brain
42	chr6:56347600-56350200	Weak transcription	Sigmoid Colon	Sigmoid Colon
43	chr6:56347600-56350800	Weak transcription	Brain Anterior Caudate	brain
44	chr6:56347600-56351200	Weak transcription	Brain Hippocampus Middle	brain
45	chr6:56347600-56351200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
46	chr6:56347600-56351400	Weak transcription	HUES6 Cell Line	embryonic stem cell
47	chr6:56347600-56351400	Weak transcription	Brain Inferior Temporal Lobe	brain
48	chr6:56347600-56351400	Weak transcription	Rectal Mucosa Donor 31	rectum
49	chr6:56347600-56355600	Weak transcription	NHEK	skin
50	chr6:56347600-56362200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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