The 2.0 version of rSNPBase

Variant report

Variant rs1540966
Chromosome Location chr10:44303920-44303921
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:44292600-44304800 Weak transcription Fetal Muscle Leg muscle
2 chr10:44293400-44304600 Weak transcription Ovary ovary
3 chr10:44295000-44311000 Weak transcription Left Ventricle heart
4 chr10:44300400-44304800 Weak transcription Fetal Kidney kidney
5 chr10:44300600-44307400 Enhancers Osteobl bone
6 chr10:44300800-44306000 Weak transcription Fetal Lung lung
7 chr10:44301000-44304800 Weak transcription Adipose Nuclei Adipose
8 chr10:44301400-44304200 Enhancers Primary T cells fromperipheralblood blood
9 chr10:44301400-44304200 Enhancers Primary Natural Killer cells fromperipheralblood blood
10 chr10:44301400-44307200 Enhancers Primary T cells from cord blood blood
11 chr10:44301600-44304600 Weak transcription Right Atrium heart
12 chr10:44302400-44304200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
13 chr10:44302400-44304200 Enhancers Primary T helper naive cells from peripheral blood blood
14 chr10:44302600-44304200 Enhancers Primary hematopoietic stem cells short term culture blood
15 chr10:44302600-44304200 Enhancers Primary T helper cells PMA-I stimulated --
16 chr10:44302600-44304200 Enhancers Primary T helper 17 cells PMA-I stimulated --
17 chr10:44302600-44304200 Enhancers Primary T helper cells fromperipheralblood blood
18 chr10:44302600-44304200 Enhancers Primary T killer naive cells fromperipheralblood blood
19 chr10:44302600-44304200 Enhancers Primary T killer memory cells from peripheral blood blood
20 chr10:44302600-44304200 Enhancers Aorta Aorta
21 chr10:44302600-44305400 Enhancers NH-A brain
22 chr10:44302600-44305600 Enhancers Dnd41 blood
23 chr10:44302800-44304200 Enhancers Primary T helper naive cells fromperipheralblood blood
24 chr10:44302800-44304200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
25 chr10:44302800-44304200 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr10:44303000-44304000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
27 chr10:44303000-44304200 Enhancers Fetal Thymus thymus
28 chr10:44303000-44307400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr10:44303200-44304200 Enhancers Primary hematopoietic stem cells blood
30 chr10:44303200-44304400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr10:44303200-44304600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr10:44303200-44305400 Enhancers Muscle Satellite Cultured Cells --
33 chr10:44303400-44304000 Bivalent Enhancer Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr10:44303400-44304000 Weak transcription Thymus Thymus
35 chr10:44303400-44304200 Enhancers HUVEC blood vessel
36 chr10:44303400-44304400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
37 chr10:44303400-44305000 Enhancers NHDF-Ad bronchial
38 chr10:44303400-44305600 Enhancers HSMM muscle
39 chr10:44303600-44304200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr10:44303600-44304600 Weak transcription Fetal Muscle Trunk muscle
41 chr10:44303600-44305000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr10:44303600-44311000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr10:44303800-44304200 Enhancers Primary T regulatory cells fromperipheralblood blood
44 chr10:44303800-44304400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015