Variant report

Variant	rs7910172
Chromosome Location	chr10:44294699-44294700
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 52 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:52)

rs_ID	r²[population]
rs10751339	0.86[YRI][hapmap]
rs10751342	0.82[AFR][1000 genomes]
rs10751344	0.82[CHD][hapmap];0.80[TSI][hapmap];0.85[ASN][1000 genomes]
rs10751345	0.87[CEU][hapmap];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10793479	0.82[AFR][1000 genomes]
rs10793491	0.84[CHD][hapmap];0.83[TSI][hapmap];0.85[ASN][1000 genomes]
rs10793492	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10793493	0.88[ASN][1000 genomes]
rs10793494	0.83[ASN][1000 genomes]
rs10793495	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10793496	0.94[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.92[MEX][hapmap];1.00[MKK][hapmap];0.89[TSI][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10793497	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10793498	0.94[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.92[MEX][hapmap];1.00[MKK][hapmap];0.89[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10899903	0.87[ASN][1000 genomes]
rs10899904	0.85[ASN][1000 genomes]
rs10899906	0.93[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10899909	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10899910	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs10899911	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10899913	0.95[ASN][1000 genomes]
rs10899916	0.88[ASN][1000 genomes]
rs10899917	0.84[ASN][1000 genomes]
rs11238672	0.86[YRI][hapmap]
rs12254433	0.88[ASN][1000 genomes]
rs1335887	0.85[ASN][1000 genomes]
rs1335888	0.85[ASN][1000 genomes]
rs1335896	0.82[AFR][1000 genomes]
rs1537796	0.84[ASN][1000 genomes]
rs1540966	0.84[ASN][1000 genomes]
rs1540968	0.84[ASN][1000 genomes]
rs1998747	0.85[ASN][1000 genomes]
rs2009557	0.96[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2094070	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2863760	0.95[ASN][1000 genomes]
rs2863762	0.85[ASN][1000 genomes]
rs2902565	0.85[ASN][1000 genomes]
rs2902566	0.85[ASN][1000 genomes]
rs3750724	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3901013	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4245610	0.84[ASN][1000 genomes]
rs4536161	0.84[AFR][1000 genomes]
rs4536162	0.81[AFR][1000 genomes]
rs4948773	0.85[AFR][1000 genomes]
rs4948777	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4948778	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6593368	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7077599	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7910184	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7916028	0.84[ASN][1000 genomes]
rs7922745	0.84[ASN][1000 genomes]
rs871832	0.84[AFR][1000 genomes]
rs980445	0.82[AFR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44277800-44295000	Weak transcription	Spleen	Spleen
2	chr10:44286000-44302600	Weak transcription	Aorta	Aorta
3	chr10:44290000-44300600	Weak transcription	Osteobl	bone
4	chr10:44290000-44303200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr10:44290800-44296400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr10:44292600-44304800	Weak transcription	Fetal Muscle Leg	muscle
7	chr10:44293000-44295400	Weak transcription	Fetal Lung	lung
8	chr10:44293400-44300800	Weak transcription	Right Atrium	heart
9	chr10:44293400-44304600	Weak transcription	Ovary	ovary
10	chr10:44294200-44294800	Weak transcription	Left Ventricle	heart
11	chr10:44294600-44294800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr10:44294600-44294800	Enhancers	Right Ventricle	heart
13	chr10:44294600-44295000	Enhancers	NHDF-Ad	bronchial

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