Variant report

Variant	rs10899904
Chromosome Location	chr10:44278645-44278646
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 45 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs10751343	0.81[AFR][1000 genomes]
rs10751344	1.00[CEU][hapmap];0.96[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10751345	1.00[ASN][1000 genomes]
rs10793483	0.81[AFR][1000 genomes]
rs10793489	0.87[AFR][1000 genomes]
rs10793490	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10793491	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10793492	0.99[ASN][1000 genomes]
rs10793493	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10793494	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10793495	0.85[ASN][1000 genomes]
rs10793496	0.85[ASN][1000 genomes]
rs10793497	0.85[ASN][1000 genomes]
rs10793498	0.85[ASN][1000 genomes]
rs10899903	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10899906	0.85[ASN][1000 genomes]
rs10899909	0.85[ASN][1000 genomes]
rs10899910	0.95[CEU][hapmap];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10899913	0.81[ASN][1000 genomes]
rs1335887	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1335888	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1998747	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2009557	0.83[ASN][1000 genomes]
rs2094070	0.94[CEU][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2152456	0.92[YRI][hapmap]
rs2297724	0.83[AFR][1000 genomes]
rs2863760	0.81[ASN][1000 genomes]
rs2863762	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2902565	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2902566	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3750724	0.85[ASN][1000 genomes]
rs3901013	0.99[ASN][1000 genomes]
rs4245609	1.00[CEU][hapmap]
rs4948771	0.83[AFR][1000 genomes]
rs4948772	0.83[AFR][1000 genomes]
rs4948777	0.85[ASN][1000 genomes]
rs4948778	0.85[ASN][1000 genomes]
rs6593368	0.85[ASN][1000 genomes]
rs7071189	0.82[AFR][1000 genomes]
rs7077599	0.85[ASN][1000 genomes]
rs7093194	0.81[AFR][1000 genomes]
rs7101084	0.81[AFR][1000 genomes]
rs7910172	0.85[ASN][1000 genomes]
rs7910184	0.85[ASN][1000 genomes]
rs871833	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44272000-44280800	Weak transcription	Right Atrium	heart
2	chr10:44277000-44278800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
3	chr10:44277200-44278800	Enhancers	Primary hematopoietic stem cells	blood
4	chr10:44277600-44278800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr10:44277800-44295000	Weak transcription	Spleen	Spleen
6	chr10:44278000-44278800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr10:44278000-44280200	Weak transcription	Left Ventricle	heart
8	chr10:44278600-44278800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
9	chr10:44278600-44280000	Weak transcription	Pancreas	Pancrea

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