Variant report

Variant	rs10793490
Chromosome Location	chr10:44276207-44276208
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAFK	chr10:44276200-44276430	HepG2	liver:	n/a	chr10:44276327-44276338 chr10:44276327-44276338

Variant related genes	Relation type
ENSG00000234973	TF binding region

Extended variants
information (count: 52 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:52)

rs_ID	r²[population]
rs10751339	0.95[CHB][hapmap];0.95[JPT][hapmap];0.89[ASN][1000 genomes]
rs10751340	0.89[ASN][1000 genomes]
rs10751341	0.86[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs10751342	0.81[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs10751344	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10793477	0.95[CHB][hapmap];0.95[JPT][hapmap];0.81[ASN][1000 genomes]
rs10793478	0.89[ASN][1000 genomes]
rs10793479	0.81[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs10793480	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10793482	0.89[ASN][1000 genomes]
rs10793491	1.00[CEU][hapmap];0.86[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10793493	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10793494	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10899886	0.91[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs10899889	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs10899903	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10899904	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10899910	0.95[CEU][hapmap];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1107925	0.87[AFR][1000 genomes]
rs11238672	0.95[CHB][hapmap];0.95[JPT][hapmap];0.88[ASN][1000 genomes]
rs11238680	0.95[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs11238686	0.94[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs11238687	0.94[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs1335887	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1335888	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1335895	0.86[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs1335896	0.81[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs1467835	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1467836	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap]
rs1467837	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap]
rs1537800	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1998747	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2094070	0.95[CEU][hapmap];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2863762	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2902565	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2902566	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3901013	0.80[EUR][1000 genomes]
rs4245609	1.00[CEU][hapmap]
rs4338479	0.86[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs4536161	0.82[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs4536162	0.86[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs4948756	0.89[ASN][1000 genomes]
rs4948758	0.87[ASN][1000 genomes]
rs4948762	0.87[ASN][1000 genomes]
rs4948773	0.83[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs7475934	0.85[ASN][1000 genomes]
rs7901738	0.89[ASN][1000 genomes]
rs7916533	0.95[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs7917980	0.94[CHB][hapmap];0.95[JPT][hapmap];0.90[YRI][hapmap];0.86[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs871832	0.82[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs871833	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs980445	0.80[AFR][1000 genomes];0.89[ASN][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44271200-44277000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:44271200-44277400	Weak transcription	Spleen	Spleen
3	chr10:44272000-44280800	Weak transcription	Right Atrium	heart
4	chr10:44272800-44277000	Weak transcription	Pancreas	Pancrea
5	chr10:44273800-44277000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr10:44274400-44276600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
7	chr10:44274400-44277200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
8	chr10:44274600-44277000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
9	chr10:44274600-44277000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
10	chr10:44274600-44277000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
11	chr10:44274600-44277000	Weak transcription	Fetal Thymus	thymus
12	chr10:44274600-44277000	Weak transcription	Left Ventricle	heart
13	chr10:44274800-44276800	Weak transcription	Primary T cells from cord blood	blood
14	chr10:44274800-44276800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
15	chr10:44274800-44277000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
16	chr10:44274800-44277000	Weak transcription	Lung	lung
17	chr10:44275000-44276400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr10:44275600-44276600	Weak transcription	Stomach Mucosa	stomach
19	chr10:44275800-44277000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr10:44276000-44276800	Enhancers	Primary hematopoietic stem cells	blood
21	chr10:44276000-44277000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr10:44276000-44277000	Weak transcription	Gastric	stomach
23	chr10:44276000-44278000	Enhancers	Dnd41	blood
24	chr10:44276000-44278000	Enhancers	HSMMtube	muscle

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