Variant report

Variant	rs10793477
Chromosome Location	chr10:44224244-44224245
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:44222418..44225154-chr10:44227350..44232031,4	K562	blood:

Variant related genes	Relation type
ENSG00000224162	Chromatin interaction

Extended variants
information (count: 61 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:61)

rs_ID	r²[population]
rs10751337	0.88[CEU][hapmap];0.89[YRI][hapmap];0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10751339	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10751340	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10751341	0.91[ASN][1000 genomes]
rs10751342	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10751345	0.92[CEU][hapmap];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10793469	0.89[ASN][1000 genomes]
rs10793478	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10793479	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10793480	0.94[CHB][hapmap];0.95[JPT][hapmap]
rs10793482	0.88[ASN][1000 genomes]
rs10793490	0.95[CHB][hapmap];0.95[JPT][hapmap];0.81[ASN][1000 genomes]
rs10793492	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10793495	0.81[EUR][1000 genomes]
rs10793496	0.84[CEU][hapmap];0.81[EUR][1000 genomes]
rs10793497	0.83[CEU][hapmap];0.81[EUR][1000 genomes]
rs10793498	0.84[CEU][hapmap];0.81[EUR][1000 genomes]
rs10899860	0.89[ASN][1000 genomes]
rs10899863	0.89[ASN][1000 genomes]
rs10899865	0.89[ASN][1000 genomes]
rs10899866	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10899867	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10899884	0.85[EUR][1000 genomes]
rs10899886	0.91[ASN][1000 genomes]
rs10899889	0.94[CHB][hapmap];0.95[JPT][hapmap];0.89[ASN][1000 genomes]
rs10899906	0.80[EUR][1000 genomes]
rs10899909	0.88[CEU][hapmap];0.81[EUR][1000 genomes]
rs11238634	0.88[ASN][1000 genomes]
rs11238639	0.89[ASN][1000 genomes]
rs11238672	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11238680	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs11238686	0.88[ASN][1000 genomes]
rs11238687	0.88[ASN][1000 genomes]
rs1335895	0.91[ASN][1000 genomes]
rs1335896	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1467835	0.95[CHB][hapmap];0.95[JPT][hapmap]
rs1467836	0.94[CHB][hapmap];0.95[JPT][hapmap]
rs1467837	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs1537800	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs2009557	0.80[EUR][1000 genomes]
rs2050502	0.89[ASN][1000 genomes]
rs3750724	0.84[CEU][hapmap];0.81[EUR][1000 genomes]
rs3901013	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4338479	0.91[ASN][1000 genomes]
rs4536161	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4536162	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4948756	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4948758	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4948762	0.88[ASN][1000 genomes]
rs4948773	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7094994	0.89[ASN][1000 genomes]
rs7475934	0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7901738	0.88[ASN][1000 genomes]
rs7907917	0.87[ASN][1000 genomes]
rs7916533	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs7917980	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs7922095	0.89[ASN][1000 genomes]
rs871832	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs871833	0.84[ASN][1000 genomes]
rs951260	0.89[ASN][1000 genomes]
rs980445	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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