Variant report

Variant	rs4338479
Chromosome Location	chr10:44229492-44229493
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:44222418..44225154-chr10:44227350..44232031,4	K562	blood:

Variant related genes	Relation type
ENSG00000271173	Chromatin interaction

Extended variants
information (count: 84 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:84)

rs_ID	r²[population]
rs10751339	0.99[ASN][1000 genomes]
rs10751340	0.99[ASN][1000 genomes]
rs10751341	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10751342	0.98[ASN][1000 genomes]
rs10751343	0.84[AMR][1000 genomes]
rs10793469	0.81[ASN][1000 genomes]
rs10793477	0.91[ASN][1000 genomes]
rs10793478	0.99[ASN][1000 genomes]
rs10793479	0.99[ASN][1000 genomes]
rs10793482	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10793483	0.84[AMR][1000 genomes]
rs10793484	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs10793489	0.82[AMR][1000 genomes]
rs10793490	0.86[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs10899860	0.81[ASN][1000 genomes]
rs10899863	0.81[ASN][1000 genomes]
rs10899865	0.81[ASN][1000 genomes]
rs10899866	0.84[ASN][1000 genomes]
rs10899867	0.85[ASN][1000 genomes]
rs10899886	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10899889	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10899890	0.85[AMR][1000 genomes]
rs10899891	0.80[AMR][1000 genomes]
rs10899893	0.84[AMR][1000 genomes]
rs10899900	0.84[AMR][1000 genomes]
rs10899901	0.84[AMR][1000 genomes]
rs10899905	0.82[AMR][1000 genomes]
rs1107925	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs11238634	0.80[ASN][1000 genomes]
rs11238639	0.81[ASN][1000 genomes]
rs11238672	0.98[ASN][1000 genomes]
rs11238680	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11238686	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11238687	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11238705	0.82[AMR][1000 genomes]
rs12258494	0.85[AMR][1000 genomes]
rs12570501	0.86[AMR][1000 genomes]
rs1335894	0.85[AMR][1000 genomes]
rs1335895	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1335896	0.99[ASN][1000 genomes]
rs1537797	0.80[AMR][1000 genomes]
rs1537798	0.85[AMR][1000 genomes]
rs1572377	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs17154279	0.86[AMR][1000 genomes]
rs2050502	0.82[ASN][1000 genomes]
rs2050503	0.84[AMR][1000 genomes]
rs2297724	0.82[AMR][1000 genomes]
rs4080021	0.80[AMR][1000 genomes]
rs4245608	0.84[AMR][1000 genomes]
rs4534528	0.85[AMR][1000 genomes]
rs4536161	0.94[ASN][1000 genomes]
rs4536162	0.94[ASN][1000 genomes]
rs4948756	0.99[ASN][1000 genomes]
rs4948758	0.97[ASN][1000 genomes]
rs4948759	0.85[AMR][1000 genomes]
rs4948762	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4948766	0.85[AMR][1000 genomes]
rs4948767	0.86[AMR][1000 genomes]
rs4948768	0.85[AMR][1000 genomes]
rs4948771	0.82[AMR][1000 genomes]
rs4948772	0.82[AMR][1000 genomes]
rs4948773	0.92[ASN][1000 genomes]
rs4948774	0.84[AMR][1000 genomes]
rs7071189	0.82[AMR][1000 genomes]
rs7093194	0.82[AMR][1000 genomes]
rs7094994	0.81[ASN][1000 genomes]
rs7101084	0.84[AMR][1000 genomes]
rs74138024	0.80[AMR][1000 genomes]
rs74138025	0.85[AMR][1000 genomes]
rs7475934	0.87[ASN][1000 genomes]
rs7901738	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7911606	0.86[AMR][1000 genomes]
rs7916533	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7917980	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7922095	0.81[ASN][1000 genomes]
rs871832	0.91[ASN][1000 genomes]
rs871833	0.85[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs883474	0.86[AMR][1000 genomes]
rs951260	0.81[ASN][1000 genomes]
rs951798	0.84[AMR][1000 genomes]
rs964877	0.84[AMR][1000 genomes]
rs980445	0.99[ASN][1000 genomes]
rs980446	0.85[AMR][1000 genomes]
rs980447	0.81[AMR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44228000-44235400	Weak transcription	Right Atrium	heart

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