Variant report

Variant	rs4948767
Chromosome Location	chr10:44249686-44249687
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 70 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:70)

rs_ID	r²[population]
rs10751337	0.87[ASN][1000 genomes]
rs10751341	0.86[AMR][1000 genomes]
rs10751343	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10793476	0.85[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs10793482	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs10793483	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10793484	0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10793489	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10899886	0.86[AMR][1000 genomes]
rs10899889	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs10899890	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10899891	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10899893	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10899894	0.99[ASN][1000 genomes]
rs10899896	0.93[ASN][1000 genomes]
rs10899897	0.97[ASN][1000 genomes]
rs10899900	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10899901	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10899905	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10899907	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10899908	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10899912	0.80[EUR][1000 genomes]
rs10899914	0.80[EUR][1000 genomes]
rs10899915	0.80[EUR][1000 genomes]
rs1107925	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11238680	0.84[AMR][1000 genomes]
rs11238686	0.86[AMR][1000 genomes]
rs11238687	0.86[AMR][1000 genomes]
rs11238705	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12258494	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12570501	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1335894	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1335895	0.86[AMR][1000 genomes]
rs1537797	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1537798	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1572377	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17154279	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2050503	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2297724	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2863761	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4080021	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4245608	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4338479	0.86[AMR][1000 genomes]
rs4534528	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4948759	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4948762	0.86[AMR][1000 genomes]
rs4948766	0.82[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4948768	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4948771	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4948772	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4948774	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4948776	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs58086514	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs60407866	0.82[ASN][1000 genomes]
rs7071189	0.96[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7093194	0.96[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7101084	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs74138024	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs74138025	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs751466	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7901738	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs7903170	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7911606	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7916533	0.87[AMR][1000 genomes]
rs7917980	0.86[AMR][1000 genomes]
rs883474	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs951798	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs964877	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs980446	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs980447	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44248600-44250200	Enhancers	H1 Cell Line	embryonic stem cell
2	chr10:44248600-44250800	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr10:44248600-44251600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
4	chr10:44249000-44250000	Enhancers	iPS-20b Cell Line	embryonic stem cell
5	chr10:44249200-44250400	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
6	chr10:44249400-44250400	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr10:44249400-44250600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr10:44249600-44256800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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