Variant report

Variant	rs10751337
Chromosome Location	chr10:44223771-44223772
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAX	chr10:44223722-44224007	K562	blood:	n/a	chr10:44223865-44223874

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:44222418..44225154-chr10:44227350..44232031,4	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF485-7	chr10:44223665-44224176	NONHSAT012989

Variant related genes	Relation type
UQCRHP3	TF binding region
ENSG00000224162	Chromatin interaction

Extended variants
information (count: 72 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:72)

rs_ID	r²[population]
rs10751332	0.89[ASN][1000 genomes]
rs10751339	0.88[CEU][hapmap];0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10751340	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10751342	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10751343	0.88[ASN][1000 genomes]
rs10793470	0.86[ASN][1000 genomes]
rs10793471	0.88[ASN][1000 genomes]
rs10793476	0.99[ASN][1000 genomes]
rs10793477	0.88[CEU][hapmap];0.89[YRI][hapmap];0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10793478	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10793479	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs10793483	0.87[ASN][1000 genomes]
rs10793484	0.88[ASN][1000 genomes]
rs10793489	0.85[ASN][1000 genomes]
rs10793496	0.88[MEX][hapmap]
rs10793498	0.88[MEX][hapmap]
rs10899861	0.88[ASN][1000 genomes]
rs10899864	0.89[ASN][1000 genomes]
rs10899890	0.90[ASN][1000 genomes]
rs10899891	0.88[ASN][1000 genomes]
rs10899893	0.88[ASN][1000 genomes]
rs10899894	0.88[ASN][1000 genomes]
rs10899896	0.83[ASN][1000 genomes]
rs10899897	0.87[ASN][1000 genomes]
rs10899900	0.85[ASN][1000 genomes]
rs10899901	0.85[ASN][1000 genomes]
rs1107925	0.92[ASN][1000 genomes]
rs11238637	0.88[ASN][1000 genomes]
rs11238672	0.88[CEU][hapmap];0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11238705	0.85[ASN][1000 genomes]
rs12218690	0.87[ASN][1000 genomes]
rs12258494	0.94[ASN][1000 genomes]
rs12413246	0.89[ASN][1000 genomes]
rs12570501	0.92[ASN][1000 genomes]
rs1335894	0.94[ASN][1000 genomes]
rs1335896	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1537797	0.94[ASN][1000 genomes]
rs1537798	0.94[ASN][1000 genomes]
rs1537800	0.88[CEU][hapmap]
rs1572377	0.94[ASN][1000 genomes]
rs17154279	0.95[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs2050503	0.85[ASN][1000 genomes]
rs2152456	0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[JPT][hapmap]
rs2297724	0.85[ASN][1000 genomes]
rs4080021	0.85[ASN][1000 genomes]
rs4245608	0.83[ASN][1000 genomes]
rs4534528	0.93[ASN][1000 genomes]
rs4536161	0.82[AMR][1000 genomes]
rs4536162	0.83[AMR][1000 genomes]
rs4948756	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4948758	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4948759	0.94[ASN][1000 genomes]
rs4948766	0.92[ASN][1000 genomes]
rs4948767	0.87[ASN][1000 genomes]
rs4948768	0.88[ASN][1000 genomes]
rs4948771	0.85[ASN][1000 genomes]
rs4948772	0.83[ASN][1000 genomes]
rs4948774	0.85[ASN][1000 genomes]
rs58086514	0.99[ASN][1000 genomes]
rs60407866	0.93[ASN][1000 genomes]
rs7101084	0.87[ASN][1000 genomes]
rs74138024	0.92[ASN][1000 genomes]
rs74138025	0.92[ASN][1000 genomes]
rs7903170	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs7911606	0.92[ASN][1000 genomes]
rs883474	0.92[ASN][1000 genomes]
rs951259	0.88[ASN][1000 genomes]
rs951798	0.85[ASN][1000 genomes]
rs964877	0.85[ASN][1000 genomes]
rs980445	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs980446	0.94[ASN][1000 genomes]
rs980447	0.94[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs10751337	GPRIN2	cis	parietal	SCAN

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44223600-44224000	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:44223600-44224200	Bivalent Enhancer	Placenta	Placenta

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