Variant report

Variant	rs951259
Chromosome Location	chr10:44201064-44201065
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs10751332	0.99[ASN][1000 genomes]
rs10751337	0.95[CHB][hapmap];0.93[CHD][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs10793470	0.96[ASN][1000 genomes]
rs10793471	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10793476	1.00[CEU][hapmap];0.89[ASN][1000 genomes]
rs10793480	0.81[CEU][hapmap]
rs10899861	0.98[ASN][1000 genomes]
rs10899864	0.99[ASN][1000 genomes]
rs10899890	0.82[ASN][1000 genomes]
rs10899897	0.80[ASN][1000 genomes]
rs10899908	1.00[CEU][hapmap]
rs1107925	0.82[ASN][1000 genomes]
rs11238633	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11238637	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11238680	0.82[MEX][hapmap]
rs12218690	0.99[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12258494	0.84[ASN][1000 genomes]
rs12413246	0.99[ASN][1000 genomes]
rs12570501	0.82[ASN][1000 genomes]
rs1335894	0.84[ASN][1000 genomes]
rs1537797	0.84[ASN][1000 genomes]
rs1537798	0.84[ASN][1000 genomes]
rs1572377	0.84[ASN][1000 genomes]
rs17154279	1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs2050502	0.95[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs2152456	1.00[CEU][hapmap];0.91[CHB][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.88[TSI][hapmap]
rs3750725	0.82[MEX][hapmap]
rs4534528	0.83[ASN][1000 genomes]
rs4948759	0.84[ASN][1000 genomes]
rs4948766	0.82[ASN][1000 genomes]
rs4948776	1.00[CEU][hapmap]
rs58086514	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs60407866	0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7101084	0.80[ASN][1000 genomes]
rs74138024	0.82[ASN][1000 genomes]
rs74138025	0.82[ASN][1000 genomes]
rs7903170	1.00[CEU][hapmap];0.95[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];1.00[TSI][hapmap];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7911606	0.82[ASN][1000 genomes]
rs7916533	0.86[MEX][hapmap]
rs883474	0.82[ASN][1000 genomes]
rs980446	0.84[ASN][1000 genomes]
rs980447	0.84[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44195800-44203200	Weak transcription	Ovary	ovary
2	chr10:44196000-44203800	Weak transcription	Right Atrium	heart
3	chr10:44198600-44203000	Weak transcription	Pancreas	Pancrea
4	chr10:44198800-44203000	Weak transcription	Right Ventricle	heart
5	chr10:44198800-44203200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr10:44199200-44202600	Weak transcription	Adipose Nuclei	Adipose
7	chr10:44199800-44201600	Weak transcription	Skeletal Muscle Male	skeletal muscle
8	chr10:44200000-44201600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr10:44200000-44201600	Weak transcription	Spleen	Spleen
10	chr10:44200400-44201600	Weak transcription	Left Ventricle	heart

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