Variant report

Variant	rs17154279
Chromosome Location	chr10:44242548-44242549
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAFK	chr10:44242481-44242734	K562	blood:	n/a	n/a

Variant related genes	Relation type
TCEB1P30	TF binding region

Extended variants
information (count: 82 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:82)

rs_ID	r²[population]
rs10751332	0.81[ASN][1000 genomes]
rs10751337	0.95[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs10751341	0.86[AMR][1000 genomes]
rs10751343	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10793471	0.82[ASN][1000 genomes]
rs10793476	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs10793480	0.81[CEU][hapmap];1.00[YRI][hapmap]
rs10793482	0.93[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs10793483	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10793484	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10793489	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10899861	0.80[ASN][1000 genomes]
rs10899864	0.81[ASN][1000 genomes]
rs10899886	0.86[AMR][1000 genomes]
rs10899889	0.93[YRI][hapmap];0.98[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs10899890	0.81[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10899891	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10899893	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10899894	0.84[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs10899896	0.82[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs10899897	0.84[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs10899900	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10899901	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10899905	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10899907	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10899908	1.00[CEU][hapmap];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10899912	0.80[EUR][1000 genomes]
rs10899914	0.80[EUR][1000 genomes]
rs10899915	0.80[EUR][1000 genomes]
rs1107925	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11238637	0.82[ASN][1000 genomes]
rs11238680	0.84[AMR][1000 genomes]
rs11238686	0.86[AMR][1000 genomes]
rs11238687	0.86[AMR][1000 genomes]
rs11238705	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12218690	0.82[ASN][1000 genomes]
rs12258494	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12413246	0.81[ASN][1000 genomes]
rs12570501	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1335894	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1335895	0.86[AMR][1000 genomes]
rs1467835	1.00[YRI][hapmap]
rs1467836	0.86[YRI][hapmap]
rs1537797	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1537798	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1572377	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2050503	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2152456	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2297724	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2863761	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4080021	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4245608	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4338479	0.86[AMR][1000 genomes]
rs4534528	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4948759	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4948762	0.86[AMR][1000 genomes]
rs4948766	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4948767	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4948768	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4948771	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4948772	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4948774	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4948776	1.00[CEU][hapmap];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs58086514	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs60407866	0.86[ASN][1000 genomes]
rs7071189	0.96[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7093194	0.96[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7101084	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs74138024	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74138025	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs751466	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7901738	0.95[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs7903170	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7911606	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7916533	0.87[AMR][1000 genomes]
rs7917980	0.86[AMR][1000 genomes]
rs883474	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs951259	0.82[ASN][1000 genomes]
rs951798	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs964877	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs980446	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs980447	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44242200-44243600	Weak transcription	Fetal Muscle Trunk	muscle
2	chr10:44242400-44243000	Enhancers	HSMMtube	muscle
3	chr10:44242400-44246400	Enhancers	Fetal Muscle Leg	muscle

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