Variant report

Variant	rs10899867
Chromosome Location	chr10:44207709-44207710
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 55 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:55)

rs_ID	r²[population]
rs10751337	0.88[CEU][hapmap];0.92[MEX][hapmap];0.89[MKK][hapmap];0.89[TSI][hapmap]
rs10751339	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10751340	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10751341	0.85[ASN][1000 genomes]
rs10751342	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10751345	0.92[CEU][hapmap]
rs10793469	0.95[ASN][1000 genomes]
rs10793477	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10793478	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10793479	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10793480	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs10793482	0.82[ASN][1000 genomes]
rs10793490	0.95[CHB][hapmap];1.00[JPT][hapmap]
rs10793496	0.82[ASW][hapmap];0.84[CEU][hapmap];0.87[MEX][hapmap];0.81[TSI][hapmap];0.80[YRI][hapmap]
rs10793497	0.83[CEU][hapmap]
rs10793498	0.82[ASW][hapmap];0.84[CEU][hapmap];0.87[MEX][hapmap];0.81[TSI][hapmap];0.80[YRI][hapmap]
rs10899860	0.95[ASN][1000 genomes]
rs10899863	0.95[ASN][1000 genomes]
rs10899865	0.95[ASN][1000 genomes]
rs10899866	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10899886	0.85[ASN][1000 genomes]
rs10899889	0.94[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs10899909	0.87[CEU][hapmap]
rs11238634	0.94[ASN][1000 genomes]
rs11238639	0.95[ASN][1000 genomes]
rs11238672	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11238680	1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs11238686	0.82[ASN][1000 genomes]
rs11238687	0.82[ASN][1000 genomes]
rs1335895	0.85[ASN][1000 genomes]
rs1335896	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1467835	0.95[CHB][hapmap];1.00[JPT][hapmap]
rs1467836	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs1467837	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs1537800	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2050502	0.95[ASN][1000 genomes]
rs3750724	0.84[CEU][hapmap];0.80[YRI][hapmap]
rs3901013	0.82[EUR][1000 genomes]
rs4338479	0.85[ASN][1000 genomes]
rs4536161	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4536162	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4948756	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4948758	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4948762	0.82[ASN][1000 genomes]
rs4948773	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7094994	0.95[ASN][1000 genomes]
rs7901738	0.82[ASN][1000 genomes]
rs7907917	0.93[ASN][1000 genomes]
rs7916533	1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs7917980	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs7922095	0.95[ASN][1000 genomes]
rs871832	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs871833	0.81[ASN][1000 genomes]
rs951260	0.95[ASN][1000 genomes]
rs980445	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44207000-44207800	Enhancers	Spleen	Spleen
2	chr10:44207400-44208800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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