Variant report

Variant	rs1335887
Chromosome Location	chr10:44280473-44280474
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:44280117..44282923-chr10:44287063..44289824,2	K562	blood:

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10751344	1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.97[TSI][hapmap];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10751345	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10793490	1.00[CEU][hapmap];0.83[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10793491	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10793492	0.82[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs10793493	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10793494	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10793495	0.85[ASN][1000 genomes]
rs10793496	0.84[CHD][hapmap];0.81[GIH][hapmap];0.85[ASN][1000 genomes]
rs10793497	0.85[ASN][1000 genomes]
rs10793498	0.84[CHD][hapmap];0.81[GIH][hapmap];0.85[ASN][1000 genomes]
rs10899886	0.83[AFR][1000 genomes]
rs10899903	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10899904	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10899906	0.85[ASN][1000 genomes]
rs10899909	0.85[ASN][1000 genomes]
rs10899910	0.95[CEU][hapmap];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10899913	0.81[ASN][1000 genomes]
rs11238686	0.86[AFR][1000 genomes]
rs11238687	0.86[AFR][1000 genomes]
rs1335888	0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1998747	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2009557	0.83[ASN][1000 genomes]
rs2094070	0.95[CEU][hapmap];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2863760	0.81[ASN][1000 genomes]
rs2863762	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2902565	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2902566	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3750724	0.85[ASN][1000 genomes]
rs3901013	0.81[AFR][1000 genomes];0.80[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4245609	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap]
rs4948777	0.85[ASN][1000 genomes]
rs4948778	0.85[ASN][1000 genomes]
rs6593368	0.85[ASN][1000 genomes]
rs7077599	0.85[ASN][1000 genomes]
rs7910172	0.85[ASN][1000 genomes]
rs7910184	0.85[ASN][1000 genomes]
rs871833	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44272000-44280800	Weak transcription	Right Atrium	heart
2	chr10:44277800-44295000	Weak transcription	Spleen	Spleen

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