Variant report

Variant	rs10793494
Chromosome Location	chr10:44284687-44284688
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF32-7	chr10:44282860-44285865	NR_002726

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10751344	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10751345	0.91[ASN][1000 genomes]
rs10793490	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10793491	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10793492	0.90[ASN][1000 genomes]
rs10793493	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10793495	0.83[ASN][1000 genomes]
rs10793496	0.83[ASN][1000 genomes]
rs10793497	0.83[ASN][1000 genomes]
rs10793498	0.83[ASN][1000 genomes]
rs10899903	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10899904	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10899906	0.83[ASN][1000 genomes]
rs10899909	0.83[ASN][1000 genomes]
rs10899910	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1335887	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1335888	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1998747	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2009557	0.81[ASN][1000 genomes]
rs2094070	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2863762	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2902565	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2902566	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3750724	0.82[ASN][1000 genomes]
rs3901013	0.93[ASN][1000 genomes]
rs4948777	0.83[ASN][1000 genomes]
rs4948778	0.83[ASN][1000 genomes]
rs6593368	0.83[ASN][1000 genomes]
rs7077599	0.83[ASN][1000 genomes]
rs7910172	0.83[ASN][1000 genomes]
rs7910184	0.83[ASN][1000 genomes]
rs871833	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv947899	chr10:44283049-44286085	Enhancers Weak transcription	TF binding region CpG island lncRNA miRNA target site	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44277800-44295000	Weak transcription	Spleen	Spleen
2	chr10:44281600-44289600	Weak transcription	Right Atrium	heart

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