Variant report

Variant	rs1605689
Chromosome Location	chr5:35441852-35441853
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:35435688..35438525-chr5:35441764..35443934,2	MCF-7	breast:

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs10041120	0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10044118	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10044161	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1508659	0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1508660	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs26197	0.90[ASN][1000 genomes]
rs26198	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs26199	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs26200	0.90[ASN][1000 genomes]
rs26201	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs26203	0.96[ASN][1000 genomes]
rs26204	0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs26205	0.94[ASN][1000 genomes]
rs27487	0.98[ASN][1000 genomes]
rs27762	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs27940	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs28020	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs284692	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs284693	0.90[ASN][1000 genomes]
rs284694	0.90[ASN][1000 genomes]
rs284695	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs284697	1.00[ASN][1000 genomes]
rs284698	0.96[ASN][1000 genomes]
rs284747	0.88[EUR][1000 genomes]
rs284749	0.88[EUR][1000 genomes]
rs32733	0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs32754	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs32755	0.88[ASN][1000 genomes]
rs32758	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs32789	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs32790	0.93[ASN][1000 genomes]
rs32791	0.98[ASN][1000 genomes]
rs39981	0.80[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs457255	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4703362	0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4703363	0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4703401	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4703402	0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58530298	0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6451200	0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6865370	0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6897316	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:35439200-35444000	Weak transcription	Esophagus	oesophagus

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