The 2.0 version of rSNPBase

Variant report

Variant rs16835699
Chromosome Location chr1:150252247-150252248
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150241800-150253400 Weak transcription Ovary ovary
2 chr1:150241800-150253800 Weak transcription Esophagus oesophagus
3 chr1:150241800-150253800 Weak transcription Gastric stomach
4 chr1:150241800-150254200 Weak transcription Spleen Spleen
5 chr1:150242000-150253400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr1:150242000-150253800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr1:150242200-150252600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr1:150242200-150253200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr1:150242200-150253200 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr1:150242200-150253400 Weak transcription Primary T cells from cord blood blood
11 chr1:150242200-150253400 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr1:150242400-150253000 Weak transcription Primary T cells fromperipheralblood blood
13 chr1:150242400-150253200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr1:150242600-150253200 Weak transcription Primary T helper cells PMA-I stimulated --
15 chr1:150245400-150253600 Weak transcription Brain Angular Gyrus brain
16 chr1:150245600-150252800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr1:150245600-150252800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr1:150245600-150252800 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr1:150245600-150253200 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr1:150245600-150253400 Weak transcription Placenta Placenta
21 chr1:150245600-150253800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr1:150245600-150253800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
23 chr1:150245600-150253800 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr1:150245600-150253800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr1:150245600-150254200 Weak transcription Lung lung
26 chr1:150245800-150252600 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr1:150245800-150252800 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr1:150245800-150253400 Weak transcription Brain Inferior Temporal Lobe brain
29 chr1:150245800-150253800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr1:150245800-150253800 Weak transcription Left Ventricle heart
31 chr1:150245800-150253800 Weak transcription Right Ventricle heart
32 chr1:150245800-150254000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr1:150246000-150252400 Weak transcription Fetal Intestine Large intestine
34 chr1:150246000-150252400 Weak transcription Stomach Smooth Muscle stomach
35 chr1:150246000-150253400 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr1:150246000-150253400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr1:150246000-150253800 Weak transcription H9 Cell Line embryonic stem cell
38 chr1:150246000-150254000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr1:150246200-150253400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr1:150246200-150253400 Weak transcription iPS-18 Cell Line embryonic stem cell
41 chr1:150246200-150253400 Strong transcription Fetal Adrenal Gland Adrenal Gland
42 chr1:150246200-150253600 Weak transcription Fetal Kidney kidney
43 chr1:150246200-150254000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr1:150246400-150252800 Weak transcription Brain Anterior Caudate brain
45 chr1:150246400-150252800 Weak transcription Right Atrium heart
46 chr1:150246400-150252800 Weak transcription NHDF-Ad bronchial
47 chr1:150246400-150253000 Weak transcription NHLF lung
48 chr1:150246400-150253400 Weak transcription H1 Cell Line embryonic stem cell
49 chr1:150246600-150252800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr1:150246600-150252800 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015