The 2.0 version of rSNPBase

Variant report

Variant rs57272513
Chromosome Location chr1:150436496-150436497
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150373200-150442800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:150383400-150443200 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr1:150401400-150448200 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr1:150409800-150437000 Strong transcription Fetal Thymus thymus
5 chr1:150411200-150446400 Strong transcription Dnd41 blood
6 chr1:150412000-150443000 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr1:150413600-150446200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
8 chr1:150413600-150446400 Strong transcription Primary B cells from peripheral blood blood
9 chr1:150413800-150446000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr1:150414000-150446400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
11 chr1:150414200-150440800 Strong transcription Fetal Intestine Large intestine
12 chr1:150414400-150442200 Weak transcription Fetal Heart heart
13 chr1:150419200-150441000 Weak transcription HMEC breast
14 chr1:150419200-150442200 Weak transcription NH-A brain
15 chr1:150419200-150443200 Weak transcription Psoas Muscle Psoas
16 chr1:150422800-150446400 Strong transcription Fetal Stomach stomach
17 chr1:150423000-150436600 Strong transcription Breast Myoepithelial Primary Cells Breast
18 chr1:150423800-150447200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr1:150424800-150446600 Strong transcription HUES64 Cell Line embryonic stem cell
20 chr1:150425200-150446200 Strong transcription Fetal Muscle Trunk muscle
21 chr1:150425800-150445600 Strong transcription Fetal Adrenal Gland Adrenal Gland
22 chr1:150425800-150445800 Strong transcription Fetal Muscle Leg muscle
23 chr1:150425800-150447000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr1:150426800-150438600 Strong transcription Thymus Thymus
25 chr1:150426800-150446400 Strong transcription Fetal Intestine Small intestine
26 chr1:150427000-150438400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr1:150427400-150438600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr1:150427800-150436600 Weak transcription K562 blood
29 chr1:150427800-150438000 Weak transcription HSMM muscle
30 chr1:150428400-150443200 Weak transcription Small Intestine intestine
31 chr1:150428600-150446400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr1:150428800-150438600 Strong transcription Primary hematopoietic stem cells short term culture blood
33 chr1:150429000-150442600 Weak transcription Stomach Mucosa stomach
34 chr1:150429600-150438200 Strong transcription Liver Liver
35 chr1:150429600-150439800 Strong transcription Adipose Nuclei Adipose
36 chr1:150429600-150440400 Strong transcription HUES6 Cell Line embryonic stem cell
37 chr1:150429600-150447000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr1:150429800-150438800 Strong transcription Lung lung
39 chr1:150429800-150440600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr1:150430000-150442600 Weak transcription Colonic Mucosa Colon
41 chr1:150430200-150437000 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr1:150430400-150443000 Weak transcription NHLF lung
43 chr1:150430600-150442200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
44 chr1:150430800-150437000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr1:150431000-150437000 Weak transcription Pancreas Pancrea
46 chr1:150431000-150443000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
47 chr1:150431400-150438000 Weak transcription H9 Cell Line embryonic stem cell
48 chr1:150431400-150442800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr1:150431400-150443000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr1:150431800-150439200 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015