Variant report

Variant	rs16835708
Chromosome Location	chr1:150253872-150253873
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	RAD21	chr1:150253687-150253912	GM12878	blood:	n/a	chr1:150253818-150253837 chr1:150253820-150253832
2	CTCF	chr1:150253541-150254512	MCF-7	breast:	n/a	chr1:150253820-150253838 chr1:150254249-150254262 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
3	CTCF	chr1:150253800-150253950	HMF	breast:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
4	CTCF	chr1:150253780-150253930	GM12867	blood:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
5	CTCF	chr1:150253780-150253930	HepG2	liver:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
6	RAD21	chr1:150253653-150253924	HepG2	liver:	n/a	chr1:150253818-150253837 chr1:150253820-150253832
7	CTCF	chr1:150253759-150253916	Hela-S3	cervix:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
8	CTCF	chr1:150253760-150253910	GM12869	blood:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
9	CTCF	chr1:150253820-150253970	GM12873	blood:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837
10	CTCF	chr1:150253521-150254174	MCF-7	breast:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
11	CTCF	chr1:150253705-150253989	MCF-7	breast:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
12	POLR2A	chr1:150253538-150255531	H1-hESC	embryonic stem cell:	n/a	n/a
13	E2F6	chr1:150253599-150255218	A549	lung:	n/a	chr1:150254751-150254760
14	RAD21	chr1:150253614-150253991	A549	lung:	n/a	chr1:150253818-150253837 chr1:150253820-150253832
15	SIN3AK20	chr1:150253718-150253959	H1-hESC	embryonic stem cell:	n/a	n/a
16	CTCF	chr1:150253780-150253930	AG09319	gingival:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
17	REST	chr1:150253607-150254188	A549	lung:	n/a	n/a
18	CTCF	chr1:150253751-150253956	MCF-7	breast:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
19	RAD21	chr1:150253571-150254032	HepG2	liver:	n/a	chr1:150253818-150253837 chr1:150253820-150253832
20	CTCF	chr1:150253683-150254083	Lung_OC	lung:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
21	GATA3	chr1:150253646-150254751	T-47D	breast:	n/a	chr1:150253791-150253800
22	RAD21	chr1:150253475-150254179	A549	lung:	n/a	chr1:150253818-150253837 chr1:150253820-150253832
23	ZNF384	chr1:150253616-150254002	K562	blood:	n/a	n/a
24	MXI1	chr1:150253414-150255748	IMR90	lung:	n/a	n/a
25	CTCF	chr1:150253598-150254146	IMR90	lung:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
26	CTCF	chr1:150253760-150253910	GM12872	blood:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
27	CTCF	chr1:150253740-150253890	GM12878	blood:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
28	RAD21	chr1:150253627-150254000	SK-N-SH_RA	brain:	n/a	chr1:150253818-150253837 chr1:150253820-150253832
29	CTCF	chr1:150253780-150253930	A549	lung:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
30	CTCF	chr1:150253760-150253910	AG10803	skin:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
31	CTCF	chr1:150253760-150253910	K562	blood:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
32	CTCF	chr1:150253721-150253969	GM13977	blood:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
33	CTCF	chr1:150253780-150253930	AoAF	blood vessel:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
34	CTCF	chr1:150253760-150253910	HEK293	kidney:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
35	CTCF	chr1:150253760-150253910	AG04449	skin:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
36	ZNF143	chr1:150253671-150253989	GM12878	blood:	n/a	n/a
37	SIN3AK20	chr1:150253687-150253978	SK-N-SH	brain:	n/a	n/a
38	RAD21	chr1:150253658-150253931	ECC-1	luminal epithelium:	n/a	chr1:150253818-150253837 chr1:150253820-150253832
39	CTCF	chr1:150253395-150254221	HCT-116	colon:	n/a	chr1:150253820-150253838 chr1:150253465-150253473 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
40	MAX	chr1:150253731-150255474	H1-hESC	embryonic stem cell:	n/a	chr1:150254466-150254475 chr1:150255121-150255132 chr1:150254829-150254848 chr1:150254467-150254474 chr1:150254834-150254843 chr1:150255120-150255133 chr1:150255122-150255131 chr1:150254468-150254484 chr1:150254836-150254843
41	RAD21	chr1:150253476-150254130	HCT-116	colon:	n/a	chr1:150253818-150253837 chr1:150253820-150253832
42	RUNX3	chr1:150253608-150254047	GM12878	blood:	n/a	n/a
43	POLR2A	chr1:150253635-150255360	U87	brain:	n/a	n/a
44	CTCF	chr1:150253747-150253956	GM19239	blood:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
45	JUND	chr1:150253740-150255021	H1-hESC	embryonic stem cell:	n/a	n/a
46	RAD21	chr1:150253516-150254850	MCF-7	breast:	n/a	chr1:150253818-150253837 chr1:150253820-150253832
47	CTCF	chr1:150253740-150253890	GM12874	blood:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
48	CTCF	chr1:150253780-150253930	Caco-2	colon:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
49	CTCF	chr1:150253800-150253950	BJ	skin:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836
50	CTCF	chr1:150253760-150253910	RPTEC	kidney:	n/a	chr1:150253820-150253838 chr1:150253822-150253835 chr1:150253821-150253837 chr1:150253815-150253836

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:150253842-150253892	PFSK-1	brain:	n/a
2	chr1:150253842-150253892	NT2-D1	testis:	n/a
3	chr1:150253842-150253892	HPAEpiC	pulmonary alveolar:	n/a
4	chr1:150253842-150253892	AG09309	skin:	n/a
5	chr1:150253842-150253892	PrEC	prostate:	n/a
6	chr1:150253842-150253892	HRPEpiC	eye:	n/a
7	chr1:150253842-150253892	HCM	heart:	n/a
8	chr1:150253842-150253892	SKMC	muscle:	n/a
9	chr1:150253842-150253892	HRCEpiC	kidney:	n/a
10	chr1:150253842-150253892	HUVEC	blood vessel:	n/a
11	chr1:150253842-150253892	LNCaP	prostate:	n/a
12	chr1:150253842-150253892	SK-N-SH	brain:	n/a
13	chr1:150253842-150253892	HIPEpiC	eye:	n/a
14	chr1:150253842-150253892	ECC-1	luminal epithelium:	n/a
15	chr1:150253842-150253892	AG10803	skin:	n/a
16	chr1:150253842-150253892	ovcar-3	ovarian:	n/a
17	chr1:150253842-150253892	HEEpiC	esophagus:	n/a
18	chr1:150253842-150253892	NHBE	bronchial:	n/a
19	chr1:150253842-150253892	HL-60	blood:	n/a
20	chr1:150253842-150253892	H1-hESC	embryonic stem cell:	embryo
21	chr1:150253842-150253892	ProgFib	skin:	n/a
22	chr1:150253842-150253892	HMEC	breast:	n/a
23	chr1:150253842-150253892	AG04449	skin:	fetal
24	chr1:150253842-150253892	NH-A	brain:	n/a
25	chr1:150253842-150253892	Hela-S3	cervix:	n/a
26	chr1:150253842-150253892	Hepatocyte	liver:	n/a
27	chr1:150253842-150253892	GM12891	blood:	n/a
28	chr1:150253842-150253892	GM06990	blood:	n/a
29	chr1:150253842-150253892	AoSMC	blood vessel:	n/a
30	chr1:150253842-150253892	A549	lung:	n/a
31	chr1:150253842-150253892	K562	blood:	n/a
32	chr1:150253842-150253892	HNPCEpiC	eye:	n/a
33	chr1:150253842-150253892	HCPEpiC	choroid plexus:	n/a
34	chr1:150253842-150253892	HAEpiC	amniotic membrane:	n/a
35	chr1:150253842-150253892	RPTEC	kidney:	n/a
36	chr1:150253842-150253892	BE2_C	brain:	n/a
37	chr1:150253842-150253892	BJ	skin:	n/a
38	chr1:150253842-150253892	HEK293	kidney:	embryo
39	chr1:150253842-150253892	AG04450	lung:	fetal
40	chr1:150253842-150253892	GM12878	blood:	n/a
41	chr1:150253842-150253892	GM12892	blood:	n/a
42	chr1:150253842-150253892	AG09319	gingival:	n/a
43	chr1:150253842-150253892	Jurkat	blood:	n/a
44	chr1:150253842-150253892	SK-N-SH_RA	brain:	n/a
45	chr1:150253842-150253892	HRE	kidney:	n/a
46	chr1:150253842-150253892	MCF-7	breast:	n/a
47	chr1:150253842-150253892	NB4	blood:	n/a
48	chr1:150253842-150253892	CMK	blood:	n/a
49	chr1:150253842-150253892	NHDF-neo	bronchial:	n/a
50	chr1:150253842-150253892	IMR90	lung:	fetal

No.	Distal block	Cell Line	Cell type
1	chr1:150226594..150229990-chr1:150253466..150255722,4	K562	blood:
2	chr1:150207034..150209867-chr1:150251521..150254901,4	MCF-7	breast:
3	chr1:150252708..150255493-chr1:150334761..150336728,2	K562	blood:
4	chr1:144532574..144534383-chr1:150253333..150256090,2	K562	blood:
5	chr1:150227212..150229263-chr1:150253177..150254704,26	MCF-7	breast:
6	chr1:150185925..150186466-chr1:150253711..150254243,2	MCF-7	breast:
7	chr1:150208242..150210612-chr1:150252083..150254317,2	K562	blood:
8	chr1:150252847..150256677-chr1:150333609..150339009,8	MCF-7	breast:
9	chr1:150227658..150229040-chr1:150253371..150254468,12	MCF-7	breast:
10	chr1:150229340..150230287-chr1:150253308..150254109,2	MCF-7	breast:
11	chr1:150227457..150228673-chr1:150253378..150254274,5	K562	blood:
12	chr1:149856618..149859874-chr1:150252392..150257192,4	MCF-7	breast:
13	chr1:150206509..150210612-chr1:150251950..150254898,4	K562	blood:
14	chr1:149982260..149984112-chr1:150253669..150255654,2	MCF-7	breast:
15	chr1:150252939..150254457-chr1:150336461..150338463,2	MCF-7	breast:
16	chr1:150252171..150257673-chr1:150291650..150295636,15	MCF-7	breast:
17	chr1:150246450..150248779-chr1:150251520..150254627,3	K562	blood:
18	chr1:150226746..150229990-chr1:150252728..150255652,4	K562	blood:
19	chr1:150253619..150256471-chr1:150290811..150295516,7	MCF-7	breast:
20	chr1:150205879..150210456-chr1:150251557..150256195,8	MCF-7	breast:

Variant related genes	Relation type
C1orf51	TF binding region
C1orf51	CpG island
ENSG00000118298	Chromatin interaction
ENSG00000222222	Chromatin interaction
ENSG00000163125	Chromatin interaction
ENSG00000117360	Chromatin interaction
ENSG00000201699	Chromatin interaction
ENSG00000143401	Chromatin interaction
ENSG00000184678	Chromatin interaction
ENSG00000163113	Chromatin interaction
ENSG00000271845	Chromatin interaction
ENSG00000178096	Chromatin interaction
ENSG00000184260	Chromatin interaction
ENSG00000184270	Chromatin interaction

Extended variants
information (count: 86 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:81)

rs_ID	r²[population]
rs12116970	0.81[ASN][1000 genomes]
rs12718416	0.81[ASN][1000 genomes]
rs12729719	0.81[ASN][1000 genomes]
rs13057	0.82[CHB][hapmap];0.88[JPT][hapmap];1.00[YRI][hapmap];0.85[ASN][1000 genomes]
rs16830437	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16835699	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16835782	1.00[CHB][hapmap];0.84[JPT][hapmap];0.86[YRI][hapmap];0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16835791	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16835911	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs16836130	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs16836139	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs16836442	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs16836576	0.95[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs16836594	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs16836601	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs16836786	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs16836940	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs16836943	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.83[ASN][1000 genomes]
rs1694386	0.84[JPT][hapmap]
rs2015966	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2275245	0.85[ASN][1000 genomes]
rs2275778	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs2275779	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs3737319	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs3738322	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs3806389	0.85[ASN][1000 genomes]
rs3850843	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs4926420	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs4926421	1.00[JPT][hapmap]
rs4926430	0.84[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs4970925	0.85[ASN][1000 genomes]
rs4970927	0.81[ASN][1000 genomes]
rs4970946	0.81[ASN][1000 genomes]
rs4970947	0.85[ASN][1000 genomes]
rs522068	0.81[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs56882505	0.90[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs56909494	0.90[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs57163995	0.92[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs57272513	0.83[ASN][1000 genomes]
rs57361164	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs57971032	0.84[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs58373639	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs58516261	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs59367061	0.90[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs59378360	0.84[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs59639798	0.90[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs59662772	0.84[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs60456922	0.85[ASN][1000 genomes]
rs60459288	0.90[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs60531845	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs60730811	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs60758881	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs6679726	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs6680391	0.83[ASN][1000 genomes]
rs6700009	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs6700607	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs71622690	0.82[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs73011380	0.91[ASN][1000 genomes]
rs73011384	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73011400	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73013119	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73013129	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs73015063	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs73015078	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs73015081	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs73015095	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs73015096	0.92[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs73017006	0.95[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs73017073	0.90[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs73017086	0.90[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs73017092	0.84[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs73017102	0.84[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs73019017	0.83[ASN][1000 genomes]
rs73019018	0.83[ASN][1000 genomes]
rs73019020	0.83[ASN][1000 genomes]
rs73019021	0.83[ASN][1000 genomes]
rs73019027	0.83[ASN][1000 genomes]
rs73019028	0.83[ASN][1000 genomes]
rs7543314	0.92[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs871527	0.85[ASN][1000 genomes]
rs953127	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529719	chr1:150006344-150311095	Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	100 gene(s)	inside rSNPs	diseases
2	nsv916014	chr1:150187139-150537483	Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	164 gene(s)	inside rSNPs	diseases
3	nsv1009508	chr1:150211112-150270830	Active TSS Enhancers Weak transcription Genic enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
4	nsv535154	chr1:150214907-150265508	Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
5	nsv1011223	chr1:150229205-150279380	Active TSS Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:150241800-150254200	Weak transcription	Spleen	Spleen
2	chr1:150245600-150254200	Weak transcription	Lung	lung
3	chr1:150245800-150254000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr1:150246000-150254000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr1:150246200-150254000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr1:150252600-150255600	Flanking Active TSS	Liver	Liver
7	chr1:150252800-150254000	Enhancers	Sigmoid Colon	Sigmoid Colon
8	chr1:150253200-150254000	Enhancers	Placenta Amnion	Placenta Amnion
9	chr1:150253200-150254600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr1:150253400-150254000	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr1:150253400-150254000	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr1:150253400-150254000	Enhancers	Placenta	Placenta
13	chr1:150253400-150254600	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr1:150253400-150254600	Flanking Active TSS	Primary hematopoietic stem cells	blood
15	chr1:150253400-150254600	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
16	chr1:150253400-150254800	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
17	chr1:150253400-150254800	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
18	chr1:150253400-150255200	Active TSS	iPS-20b Cell Line	embryonic stem cell
19	chr1:150253400-150255400	Flanking Active TSS	Duodenum Mucosa	Duodenum
20	chr1:150253400-150255600	Active TSS	Colon Smooth Muscle	Colon
21	chr1:150253400-150256000	Active TSS	Right Atrium	heart
22	chr1:150253400-150256000	Flanking Active TSS	HMEC	breast
23	chr1:150253600-150254000	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
24	chr1:150253600-150254000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
25	chr1:150253600-150254000	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
26	chr1:150253600-150254000	Flanking Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
27	chr1:150253600-150254000	Active TSS	Skeletal Muscle Female	skeletal muscle
28	chr1:150253600-150254000	Active TSS	HepG2	liver
29	chr1:150253600-150254200	Active TSS	H1 Cell Line	embryonic stem cell
30	chr1:150253600-150254200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
31	chr1:150253600-150254400	Active TSS	ES-I3 Cell Line	embryonic stem cell
32	chr1:150253600-150254400	Flanking Active TSS	Primary T cells fromperipheralblood	blood
33	chr1:150253600-150254600	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
34	chr1:150253600-150254600	Flanking Active TSS	NH-A	brain
35	chr1:150253600-150254600	Flanking Active TSS	NHEK	skin
36	chr1:150253600-150254600	Flanking Active TSS	Osteobl	bone
37	chr1:150253600-150254800	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
38	chr1:150253600-150254800	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
39	chr1:150253600-150254800	Flanking Active TSS	Muscle Satellite Cultured Cells	--
40	chr1:150253600-150254800	Flanking Bivalent TSS/Enh	Monocytes-CD14+_RO01746	blood
41	chr1:150253600-150255000	Active TSS	HUES64 Cell Line	embryonic stem cell
42	chr1:150253600-150255000	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr1:150253600-150255000	Active TSS	A549	lung
44	chr1:150253600-150255200	Active TSS	HUES48 Cell Line	embryonic stem cell
45	chr1:150253600-150255200	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
46	chr1:150253600-150255200	Active TSS	Brain Cingulate Gyrus	brain
47	chr1:150253600-150255200	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
48	chr1:150253600-150255400	Active TSS	iPS-15b Cell Line	embryonic stem cell
49	chr1:150253600-150255400	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
50	chr1:150253600-150255600	Active TSS	Brain Anterior Caudate	brain

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