The 2.0 version of rSNPBase

Variant report

Variant rs953127
Chromosome Location chr1:150469256-150469257
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150460600-150480200 Weak transcription Right Atrium heart
2 chr1:150460600-150480200 Weak transcription Stomach Mucosa stomach
3 chr1:150460800-150470000 Weak transcription HMEC breast
4 chr1:150460800-150470600 Weak transcription Fetal Brain Male brain
5 chr1:150460800-150476800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:150460800-150478000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr1:150460800-150480000 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr1:150461000-150486800 Weak transcription Fetal Heart heart
9 chr1:150461200-150473600 Strong transcription HUES6 Cell Line embryonic stem cell
10 chr1:150461200-150478200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr1:150461200-150478600 Strong transcription HUES64 Cell Line embryonic stem cell
12 chr1:150461400-150470800 Strong transcription Fetal Adrenal Gland Adrenal Gland
13 chr1:150461400-150475800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr1:150461400-150480000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:150461400-150480400 Strong transcription Primary T helper cells fromperipheralblood blood
16 chr1:150461400-150480400 Strong transcription Fetal Muscle Trunk muscle
17 chr1:150461400-150480600 Strong transcription Fetal Intestine Large intestine
18 chr1:150461600-150473000 Strong transcription Skeletal Muscle Female skeletal muscle
19 chr1:150461600-150473800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr1:150461800-150473800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr1:150462000-150480000 Strong transcription Fetal Stomach stomach
22 chr1:150462000-150480600 Strong transcription Fetal Intestine Small intestine
23 chr1:150462000-150485800 Strong transcription Breast Myoepithelial Primary Cells Breast
24 chr1:150462400-150473800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr1:150463200-150479800 Strong transcription Primary T helper naive cells fromperipheralblood blood
26 chr1:150463400-150477600 Weak transcription Fetal Kidney kidney
27 chr1:150463600-150471400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr1:150464000-150475600 Weak transcription Muscle Satellite Cultured Cells --
29 chr1:150464000-150477000 Weak transcription HUVEC blood vessel
30 chr1:150464200-150470000 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr1:150464200-150476800 Weak transcription Psoas Muscle Psoas
32 chr1:150464400-150471400 Weak transcription Hela-S3 cervix
33 chr1:150464400-150475400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr1:150464800-150480200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr1:150465600-150470000 Weak transcription Right Ventricle heart
36 chr1:150466000-150477800 Weak transcription Small Intestine intestine
37 chr1:150466400-150469800 Weak transcription Brain Hippocampus Middle brain
38 chr1:150466400-150470000 Weak transcription NHLF lung
39 chr1:150466400-150476600 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr1:150466600-150470600 Weak transcription NH-A brain
41 chr1:150466800-150470600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr1:150466800-150470600 Weak transcription HepG2 liver
43 chr1:150467600-150472800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr1:150468000-150479800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr1:150468000-150480800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
46 chr1:150468200-150472800 Strong transcription Esophagus oesophagus
47 chr1:150468200-150473600 Strong transcription Duodenum Smooth Muscle Duodenum
48 chr1:150468200-150473600 Strong transcription Fetal Brain Female brain
49 chr1:150468200-150474000 Strong transcription Sigmoid Colon Sigmoid Colon
50 chr1:150468200-150478000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015