The 2.0 version of rSNPBase

Variant report

Variant rs73011384
Chromosome Location chr1:150246411-150246412
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150241800-150253400 Weak transcription Ovary ovary
2 chr1:150241800-150253800 Weak transcription Esophagus oesophagus
3 chr1:150241800-150253800 Weak transcription Gastric stomach
4 chr1:150241800-150254200 Weak transcription Spleen Spleen
5 chr1:150242000-150253400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr1:150242000-150253800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr1:150242200-150248200 Weak transcription Duodenum Mucosa Duodenum
8 chr1:150242200-150248600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr1:150242200-150250000 Weak transcription Liver Liver
10 chr1:150242200-150252600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr1:150242200-150253200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr1:150242200-150253200 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr1:150242200-150253400 Weak transcription Primary T cells from cord blood blood
14 chr1:150242200-150253400 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr1:150242400-150248200 Weak transcription Primary T helper cells fromperipheralblood blood
16 chr1:150242400-150253000 Weak transcription Primary T cells fromperipheralblood blood
17 chr1:150242400-150253200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr1:150242600-150253200 Weak transcription Primary T helper cells PMA-I stimulated --
19 chr1:150244000-150246800 Enhancers Primary monocytes fromperipheralblood blood
20 chr1:150244600-150246600 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
21 chr1:150244600-150246600 Flanking Active TSS Osteobl bone
22 chr1:150244800-150246600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
23 chr1:150244800-150250600 Weak transcription HepG2 liver
24 chr1:150245400-150253600 Weak transcription Brain Angular Gyrus brain
25 chr1:150245600-150246600 Enhancers Brain Cingulate Gyrus brain
26 chr1:150245600-150246600 Enhancers Psoas Muscle Psoas
27 chr1:150245600-150247400 Weak transcription Fetal Intestine Small intestine
28 chr1:150245600-150250600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr1:150245600-150252800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr1:150245600-150252800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr1:150245600-150252800 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr1:150245600-150253200 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr1:150245600-150253400 Weak transcription Placenta Placenta
34 chr1:150245600-150253800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
35 chr1:150245600-150253800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
36 chr1:150245600-150253800 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr1:150245600-150253800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr1:150245600-150254200 Weak transcription Lung lung
39 chr1:150245800-150246600 Enhancers Cortex derived primary cultured neurospheres brain
40 chr1:150245800-150246600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
41 chr1:150245800-150246600 Enhancers Colon Smooth Muscle Colon
42 chr1:150245800-150246600 Enhancers Fetal Lung lung
43 chr1:150245800-150246600 Enhancers Fetal Stomach stomach
44 chr1:150245800-150246600 Weak transcription K562 blood
45 chr1:150245800-150246800 Enhancers Brain Substantia Nigra brain
46 chr1:150245800-150248600 Weak transcription Fetal Muscle Trunk muscle
47 chr1:150245800-150252600 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr1:150245800-150252800 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr1:150245800-150253400 Weak transcription Brain Inferior Temporal Lobe brain
50 chr1:150245800-150253800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015