The 2.0 version of rSNPBase

Variant report

Variant rs16836601
Chromosome Location chr1:150356343-150356344
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150338400-150405200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:150339400-150372800 Weak transcription Fetal Muscle Leg muscle
3 chr1:150339400-150390600 Weak transcription Fetal Muscle Trunk muscle
4 chr1:150339600-150356400 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr1:150339600-150359800 Weak transcription Monocytes-CD14+_RO01746 blood
6 chr1:150339600-150372800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr1:150339800-150368600 Weak transcription Primary hematopoietic stem cells blood
8 chr1:150339800-150390000 Weak transcription Thymus Thymus
9 chr1:150340000-150362000 Weak transcription Primary B cells from cord blood blood
10 chr1:150340000-150416800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr1:150340600-150366800 Weak transcription Fetal Brain Female brain
12 chr1:150342800-150361600 Weak transcription Fetal Thymus thymus
13 chr1:150343400-150378000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr1:150343600-150361400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:150343800-150359400 Weak transcription Duodenum Mucosa Duodenum
16 chr1:150343800-150378600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr1:150344000-150361600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr1:150345400-150358600 Weak transcription Fetal Intestine Large intestine
19 chr1:150346800-150358200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr1:150346800-150359600 Weak transcription Primary monocytes fromperipheralblood blood
21 chr1:150346800-150361600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr1:150347000-150358800 Weak transcription Small Intestine intestine
23 chr1:150347000-150392400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr1:150347200-150357200 Weak transcription Ovary ovary
25 chr1:150347200-150358000 Weak transcription Aorta Aorta
26 chr1:150347200-150359600 Weak transcription Dnd41 blood
27 chr1:150347200-150360000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr1:150347200-150360000 Weak transcription Pancreas Pancrea
29 chr1:150347200-150361000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr1:150347200-150361400 Weak transcription Primary B cells from peripheral blood blood
31 chr1:150347200-150361600 Weak transcription Psoas Muscle Psoas
32 chr1:150347200-150362000 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr1:150347200-150372400 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr1:150347200-150380000 Weak transcription iPS-18 Cell Line embryonic stem cell
35 chr1:150347400-150359200 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr1:150347800-150358800 Weak transcription Primary T cells from cord blood blood
37 chr1:150347800-150361600 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr1:150347800-150362200 Weak transcription Rectal Smooth Muscle rectum
39 chr1:150348000-150390400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr1:150348400-150372600 Weak transcription Hela-S3 cervix
41 chr1:150348600-150356400 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr1:150348600-150359600 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr1:150348600-150361800 Weak transcription Brain Angular Gyrus brain
44 chr1:150348600-150362000 Weak transcription Breast Myoepithelial Primary Cells Breast
45 chr1:150348600-150362200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr1:150348800-150356600 Weak transcription Brain Cingulate Gyrus brain
47 chr1:150348800-150357400 Weak transcription GM12878-XiMat blood
48 chr1:150348800-150358800 Weak transcription Primary T killer naive cells fromperipheralblood blood
49 chr1:150348800-150359200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr1:150349000-150356400 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015