The 2.0 version of rSNPBase

Variant report

Variant rs16844830
Chromosome Location chr2:160995961-160995962
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:160959200-161004200 Weak transcription Gastric stomach
2 chr2:160959400-161032800 Weak transcription Psoas Muscle Psoas
3 chr2:160980600-160996400 Weak transcription HSMMtube muscle
4 chr2:160983200-161005200 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr2:160990000-161005000 Weak transcription Colonic Mucosa Colon
6 chr2:160993200-161002200 Weak transcription Lung lung
7 chr2:160993600-160998600 Strong transcription HMEC breast
8 chr2:160993600-160998800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr2:160993800-160997200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
10 chr2:160994000-160997200 Genic enhancers Breast Myoepithelial Primary Cells Breast
11 chr2:160994200-160996800 Weak transcription Fetal Stomach stomach
12 chr2:160994200-160998400 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr2:160994400-160996800 Weak transcription Fetal Intestine Small intestine
14 chr2:160994400-160996800 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr2:160994400-160998600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr2:160994400-160999000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr2:160994400-161002000 Weak transcription Esophagus oesophagus
18 chr2:160994400-161002000 Weak transcription Fetal Intestine Large intestine
19 chr2:160994400-161004200 Weak transcription Fetal Muscle Leg muscle
20 chr2:160994400-161014800 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr2:160994400-161037400 Weak transcription Pancreas Pancrea
22 chr2:160994600-160996800 Weak transcription Duodenum Mucosa Duodenum
23 chr2:160994600-161038000 Weak transcription Fetal Muscle Trunk muscle
24 chr2:160994800-160998000 Weak transcription NHEK skin
25 chr2:160994800-160998600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr2:160994800-161001000 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr2:160994800-161002000 Weak transcription Placenta Amnion Placenta Amnion
28 chr2:160995000-160999000 Genic enhancers HSMM muscle
29 chr2:160995200-160996600 Enhancers Muscle Satellite Cultured Cells --
30 chr2:160995600-160996800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr2:160995600-160997200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015