Variant report
Variant | rs34761275 |
---|---|
Chromosome Location | chr2:160941676-160941677 |
allele | G/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr2:160919080..160921612-chr2:160940719..160944640,3 | MCF-7 | breast: |
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000153246 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs10165829 | 0.81[ASN][1000 genomes] |
rs10165927 | 0.81[ASN][1000 genomes] |
rs10176194 | 0.81[ASN][1000 genomes] |
rs11884373 | 0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs11890075 | 1.00[ASN][1000 genomes] |
rs12469192 | 1.00[ASN][1000 genomes] |
rs12470622 | 1.00[ASN][1000 genomes] |
rs12477682 | 1.00[ASN][1000 genomes] |
rs12478021 | 1.00[ASN][1000 genomes] |
rs13390820 | 1.00[ASN][1000 genomes] |
rs13394453 | 0.87[ASN][1000 genomes] |
rs13401953 | 0.88[ASN][1000 genomes] |
rs13403826 | 1.00[ASN][1000 genomes] |
rs13429856 | 1.00[ASN][1000 genomes] |
rs13432255 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs13432522 | 1.00[ASN][1000 genomes] |
rs16844830 | 0.87[ASN][1000 genomes] |
rs2667026 | 0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs3109389 | 0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs3755547 | 0.87[ASN][1000 genomes] |
rs4337434 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4473342 | 0.87[ASN][1000 genomes] |
rs59236613 | 0.97[ASN][1000 genomes] |
rs61377083 | 0.97[ASN][1000 genomes] |
rs62175554 | 0.98[ASN][1000 genomes] |
rs6432594 | 1.00[ASN][1000 genomes] |
rs6735425 | 0.98[ASN][1000 genomes] |
rs6747699 | 1.00[ASN][1000 genomes] |
rs6758074 | 1.00[ASN][1000 genomes] |
rs6760500 | 1.00[ASN][1000 genomes] |
rs7586660 | 0.87[ASN][1000 genomes] |
rs7599127 | 0.98[ASN][1000 genomes] |
rs9973856 | 0.89[ASN][1000 genomes] |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr2:160941200-160946200 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |
2 | chr2:160941600-160943200 | ZNF genes & repeats | Aorta | Aorta |