Variant report

Variant	rs16903604
Chromosome Location	chr5:37371579-37371580
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:411)
CpG islands
(count:61)
Chromatin interactive
region (count:10)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:411 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	YY1	chr5:37371011-37371588	SK-N-SH_RA	brain:	n/a	n/a
2	POLR2A	chr5:37370830-37372083	GM12878	blood:	n/a	n/a
3	RELA	chr5:37370844-37371766	GM10847	blood:	n/a	n/a
4	CREB1	chr5:37370650-37371782	HepG2	liver:	n/a	n/a
5	POLR2A	chr5:37370825-37371811	U87	brain:	n/a	n/a
6	MYBL2	chr5:37370837-37371705	HepG2	liver:	n/a	n/a
7	POLR2A	chr5:37370845-37371993	SK-N-SH	brain:	n/a	n/a
8	PAX5	chr5:37370933-37371861	GM12878	blood:	n/a	chr5:37371615-37371632 chr5:37371215-37371224 chr5:37371174-37371183
9	POLR2A	chr5:37370988-37371684	HepG2	liver:	n/a	n/a
10	POLR2A	chr5:37370929-37371797	Gliobla	brain:	n/a	n/a
11	HEY1	chr5:37370871-37371620	HepG2	liver:	n/a	n/a
12	FOXM1	chr5:37370845-37371836	GM12878	blood:	n/a	n/a
13	POLR2A	chr5:37370537-37371650	Hela-S3	cervix:	n/a	n/a
14	POLR2A	chr5:37370915-37371913	GM12878	blood:	n/a	n/a
15	MAX	chr5:37370699-37371847	HepG2	liver:	n/a	n/a
16	BCL3	chr5:37370732-37371729	A549	lung:	n/a	chr5:37371215-37371224
17	ZNF143	chr5:37370632-37371964	K562	blood:	n/a	n/a
18	TCF12	chr5:37370715-37372058	A549	lung:	n/a	n/a
19	REST	chr5:37370694-37371696	K562	blood:	n/a	n/a
20	GABPA	chr5:37370915-37371745	HL-60	blood:	n/a	chr5:37371218-37371225
21	WRNIP1	chr5:37370573-37371931	GM12878	blood:	n/a	n/a
22	TRIM28	chr5:37370855-37372147	K562	blood:	n/a	n/a
23	TEAD4	chr5:37370673-37371825	K562	blood:	n/a	n/a
24	STAT1	chr5:37370795-37371925	GM12878	blood:	n/a	n/a
25	SIN3A	chr5:37370559-37371908	H1-hESC	embryonic stem cell:	n/a	chr5:37371120-37371130
26	POLR2A	chr5:37370932-37371845	GM12891	blood:	n/a	n/a
27	MAX	chr5:37370727-37371823	H1-hESC	embryonic stem cell:	n/a	n/a
28	POLR2A	chr5:37370459-37371987	PFSK-1	brain:	n/a	n/a
29	PML	chr5:37370737-37372112	K562	blood:	n/a	n/a
30	BHLHE40	chr5:37370906-37372116	GM12878	blood:	n/a	n/a
31	SRF	chr5:37370889-37371814	MCF-7	breast:	n/a	n/a
32	MYC	chr5:37371424-37371613	MCF-7	breast:	n/a	n/a
33	POLR2A	chr5:37370512-37372539	K562	blood:	n/a	n/a
34	SPI1	chr5:37370952-37371693	HL-60	blood:	n/a	chr5:37371215-37371228 chr5:37371265-37371274 chr5:37371266-37371273 chr5:37371216-37371225 chr5:37371214-37371227
35	POLR2A	chr5:37371417-37371623	HepG2	liver:	n/a	n/a
36	TAF1	chr5:37370832-37371695	ECC-1	luminal epithelium:	n/a	n/a
37	MXI1	chr5:37370717-37371760	HepG2	liver:	n/a	n/a
38	RUNX3	chr5:37370920-37371789	GM12878	blood:	n/a	n/a
39	TAF1	chr5:37370795-37371717	H1-hESC	embryonic stem cell:	n/a	n/a
40	GABPA	chr5:37370750-37371762	HL-60	blood:	n/a	chr5:37371218-37371225
41	POLR2A	chr5:37370911-37371762	MCF-7	breast:	n/a	n/a
42	SMARCB1	chr5:37370810-37371735	Hela-S3	cervix:	n/a	n/a
43	POLR2A	chr5:37370715-37371924	HL-60	blood:	n/a	n/a
44	NFIC	chr5:37370910-37371717	GM12878	blood:	n/a	n/a
45	TAF1	chr5:37370935-37371757	MCF-7	breast:	n/a	n/a
46	MAX	chr5:37370744-37371647	Hela-S3	cervix:	n/a	n/a
47	EP300	chr5:37371021-37371775	GM12878	blood:	n/a	n/a
48	GABPA	chr5:37370452-37372164	MCF-7	breast:	n/a	chr5:37371218-37371225
49	MAFK	chr5:37371144-37371696	HepG2	liver:	n/a	n/a
50	BRCA1	chr5:37371056-37371760	H1-hESC	embryonic stem cell:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr5:37371555-37371605	ECC-1	luminal epithelium:	n/a
2	chr5:37371555-37371605	HMEC	breast:	n/a
3	chr5:37371555-37371605	BJ	skin:	n/a
4	chr5:37371555-37371605	H1-hESC	embryonic stem cell:	embryo
5	chr5:37371555-37371605	MCF-7	breast:	n/a
6	chr5:37371555-37371605	HAEpiC	amniotic membrane:	n/a
7	chr5:37371555-37371605	A549	lung:	n/a
8	chr5:37371555-37371605	SK-N-MC	brain:	n/a
9	chr5:37371555-37371605	PFSK-1	brain:	n/a
10	chr5:37371555-37371605	HCPEpiC	choroid plexus:	n/a
11	chr5:37371555-37371605	HL-60	blood:	n/a
12	chr5:37371555-37371605	Jurkat	blood:	n/a
13	chr5:37371555-37371605	GM12878	blood:	n/a
14	chr5:37371555-37371605	U87	brain:	n/a
15	chr5:37371555-37371605	HNPCEpiC	eye:	n/a
16	chr5:37371555-37371605	AG04450	lung:	fetal
17	chr5:37371555-37371605	RPTEC	kidney:	n/a
18	chr5:37371555-37371605	LNCaP	prostate:	n/a
19	chr5:37371555-37371605	HRPEpiC	eye:	n/a
20	chr5:37371555-37371605	GM12891	blood:	n/a
21	chr5:37371555-37371605	Caco-2	colon:	n/a
22	chr5:37371555-37371605	Hela-S3	cervix:	n/a
23	chr5:37371555-37371605	HUVEC	blood vessel:	n/a
24	chr5:37371555-37371605	NB4	blood:	n/a
25	chr5:37371555-37371605	NT2-D1	testis:	n/a
26	chr5:37371555-37371605	HRE	kidney:	n/a
27	chr5:37371555-37371605	HepG2	liver:	n/a
28	chr5:37371555-37371605	HCT-116	colon:	n/a
29	chr5:37371555-37371605	K562	blood:	n/a
30	chr5:37371555-37371605	T-47D	breast:	n/a
31	chr5:37371555-37371605	SK-N-SH	brain:	n/a
32	chr5:37371555-37371605	HEK293	kidney:	embryo
33	chr5:37371555-37371605	HCM	heart:	n/a
34	chr5:37371555-37371605	ProgFib	skin:	n/a
35	chr5:37371555-37371605	NH-A	brain:	n/a
36	chr5:37371555-37371605	HCF	heart:	n/a
37	chr5:37371555-37371605	ovcar-3	ovarian:	n/a
38	chr5:37371555-37371605	SK-N-SH_RA	brain:	n/a
39	chr5:37371555-37371605	MCF10A-Er-Src	breast:	n/a
40	chr5:37371555-37371605	IMR90	lung:	fetal
41	chr5:37371555-37371605	SKMC	muscle:	n/a
42	chr5:37371555-37371605	NHDF-neo	bronchial:	n/a
43	chr5:37371555-37371605	AG09319	gingival:	n/a
44	chr5:37371555-37371605	GM06990	blood:	n/a
45	chr5:37371555-37371605	AG10803	skin:	n/a
46	chr5:37371555-37371605	PrEC	prostate:	n/a
47	chr5:37371555-37371605	GM19239	blood:	n/a
48	chr5:37371555-37371605	BE2_C	brain:	n/a
49	chr5:37371555-37371605	SAEC	small airway:	n/a
50	chr5:37371555-37371605	HPAEpiC	pulmonary alveolar:	n/a

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:24564579..24565089-chr5:37371292..37372060,2	NB4	blood:
2	chr5:37369538..37373129-chr5:37377393..37380859,4	MCF-7	breast:
3	chr5:37370037..37373489-chr5:37377973..37381470,5	K562	blood:
4	chr5:37369760..37372730-chr5:37375256..37380889,7	MCF-7	breast:
5	chr5:36733395..36735929-chr5:37371507..37374356,2	MCF-7	breast:
6	chr1:52831372..52832067-chr5:37371102..37371661,2	HCT-116	colon:
7	chr5:37370138..37373249-chr5:37374935..37377740,7	K562	blood:
8	chr2:61404229..61405117-chr5:37371163..37371819,2	Hela-S3	cervix:
9	chr5:37370774..37371595-chr8:126009906..126010854,2	Hela-S3	cervix:
10	chr12:7052910..7053902-chr5:37371084..37371594,2	Hela-S3	cervix:

No data

Variant related genes	Relation type
NUP155	TF binding region
NUP155	CpG island
ENSG00000253513	Chromatin interaction
ENSG00000272173	Chromatin interaction
ENSG00000111678	Chromatin interaction
ENSG00000154222	Chromatin interaction
ENSG00000104549	Chromatin interaction
ENSG00000173209	Chromatin interaction
ENSG00000238923	Chromatin interaction
ENSG00000250455	Chromatin interaction
ENSG00000082068	Chromatin interaction

Extended variants
information (count: 84 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:53)

rs_ID	r²[population]
rs16903524	1.00[AMR][1000 genomes]
rs16903527	1.00[AMR][1000 genomes]
rs16903575	1.00[MEX][hapmap]
rs16903598	1.00[MEX][hapmap];1.00[AMR][1000 genomes]
rs16903600	1.00[AMR][1000 genomes]
rs16903603	1.00[AMR][1000 genomes]
rs16903613	1.00[AMR][1000 genomes]
rs16903618	1.00[AMR][1000 genomes]
rs34243761	1.00[AMR][1000 genomes]
rs57564262	1.00[AMR][1000 genomes]
rs59150742	1.00[AMR][1000 genomes]
rs59289853	1.00[AMR][1000 genomes]
rs59775401	1.00[AMR][1000 genomes]
rs59938294	1.00[AMR][1000 genomes]
rs59956868	1.00[AMR][1000 genomes]
rs60505985	1.00[AMR][1000 genomes]
rs60609972	1.00[AMR][1000 genomes]
rs60854599	1.00[AMR][1000 genomes]
rs60866810	1.00[AMR][1000 genomes]
rs61235304	1.00[AMR][1000 genomes]
rs61421708	1.00[AMR][1000 genomes]
rs61561054	1.00[AMR][1000 genomes]
rs61732654	1.00[AMR][1000 genomes]
rs6864055	1.00[AMR][1000 genomes]
rs6878467	1.00[AMR][1000 genomes]
rs6881207	1.00[MEX][hapmap]
rs73066405	1.00[AMR][1000 genomes]
rs73068410	1.00[AMR][1000 genomes]
rs73068415	1.00[AMR][1000 genomes]
rs73068449	1.00[AMR][1000 genomes]
rs73068474	1.00[AMR][1000 genomes]
rs73070406	1.00[AMR][1000 genomes]
rs73070409	1.00[AMR][1000 genomes]
rs73070411	1.00[AMR][1000 genomes]
rs73070497	1.00[AMR][1000 genomes]
rs73072214	1.00[AMR][1000 genomes]
rs73072281	1.00[AMR][1000 genomes]
rs73072296	1.00[AMR][1000 genomes]
rs73074108	1.00[AMR][1000 genomes]
rs73074115	1.00[AMR][1000 genomes]
rs73095726	1.00[AMR][1000 genomes]
rs73095728	1.00[AMR][1000 genomes]
rs73095735	1.00[AMR][1000 genomes]
rs73095736	1.00[AMR][1000 genomes]
rs73095753	1.00[AMR][1000 genomes]
rs73095756	1.00[AMR][1000 genomes]
rs7704088	1.00[AMR][1000 genomes]
rs7720731	1.00[AMR][1000 genomes]
rs7724612	1.00[MEX][hapmap]
rs7727395	1.00[AMR][1000 genomes]
rs7727585	1.00[AMR][1000 genomes]
rs7727710	1.00[AMR][1000 genomes]
rs7728924	1.00[MEX][hapmap];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:31 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530226	chr5:36906377-37606367	Weak transcription Enhancers Strong transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
2	nsv534064	chr5:37054962-37586210	Active TSS Strong transcription Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
3	nsv881511	chr5:37088627-37552852	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
4	nsv597823	chr5:37111565-37430365	Strong transcription Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
5	nsv1026554	chr5:37112133-37734859	Strong transcription Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
6	nsv537726	chr5:37112133-37734859	Weak transcription Strong transcription Enhancers Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
7	nsv1025988	chr5:37115142-37586211	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
8	nsv537727	chr5:37115142-37586211	Strong transcription Active TSS Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
9	nsv530227	chr5:37157106-37571999	Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
10	nsv880839	chr5:37173930-37465126	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
11	nsv948741	chr5:37179341-37582164	Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
12	nsv949716	chr5:37179341-37967352	Weak transcription Strong transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	58 gene(s)	inside rSNPs	diseases
13	nsv597824	chr5:37206621-37409579	Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
14	nsv597825	chr5:37206621-37430365	Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Enhancers Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
15	nsv880817	chr5:37239240-37465126	Weak transcription Bivalent Enhancer Active TSS Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
16	nsv881492	chr5:37239240-37543121	Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
17	nsv880444	chr5:37239240-37556926	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
18	nsv1015983	chr5:37240827-37666601	Strong transcription Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
19	nsv1021284	chr5:37264275-37630188	ZNF genes & repeats Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
20	nsv1029088	chr5:37285576-37604945	Weak transcription Enhancers Strong transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
21	nsv597844	chr5:37287836-37567851	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
22	nsv881076	chr5:37294473-37479198	Enhancers Strong transcription Active TSS Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
23	nsv1028058	chr5:37302941-37581735	Strong transcription Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
24	nsv537728	chr5:37302941-37581735	Flanking Active TSS Weak transcription Enhancers Strong transcription Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
25	nsv1023871	chr5:37330018-37804744	Enhancers Strong transcription Weak transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
26	nsv537729	chr5:37330018-37804744	Weak transcription Flanking Active TSS Strong transcription Genic enhancers Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
27	nsv1028054	chr5:37331852-37586211	ZNF genes & repeats Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
28	nsv537730	chr5:37331852-37586211	Strong transcription Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
29	nsv1030797	chr5:37335832-37445040	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
30	nsv471012	chr5:37349895-37545998	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
31	nsv597845	chr5:37369958-37556926	Flanking Active TSS Weak transcription Genic enhancers Enhancers Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:37369200-37372200	Active TSS	ES-I3 Cell Line	embryonic stem cell
2	chr5:37369200-37372400	Active TSS	iPS-20b Cell Line	embryonic stem cell
3	chr5:37369400-37372200	Active TSS	iPS-15b Cell Line	embryonic stem cell
4	chr5:37369600-37371800	Active TSS	Stomach Mucosa	stomach
5	chr5:37369600-37372000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
6	chr5:37369600-37372000	Active TSS	H9 Cell Line	embryonic stem cell
7	chr5:37369600-37372200	Active TSS	Psoas Muscle	Psoas
8	chr5:37369800-37371600	Active TSS	HMEC	breast
9	chr5:37369800-37371600	Active TSS	K562	blood
10	chr5:37369800-37371800	Active TSS	iPS-18 Cell Line	embryonic stem cell
11	chr5:37369800-37371800	Active TSS	Colonic Mucosa	Colon
12	chr5:37369800-37371800	Active TSS	Fetal Intestine Small	intestine
13	chr5:37369800-37372000	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr5:37369800-37372000	Active TSS	HUES48 Cell Line	embryonic stem cell
15	chr5:37369800-37372000	Active TSS	Brain Inferior Temporal Lobe	brain
16	chr5:37369800-37372200	Active TSS	H1 Cell Line	embryonic stem cell
17	chr5:37369800-37372200	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr5:37369800-37372200	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr5:37369800-37372200	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr5:37369800-37372200	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
21	chr5:37369800-37372200	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
22	chr5:37369800-37372200	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
23	chr5:37369800-37372200	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
24	chr5:37369800-37372200	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
25	chr5:37369800-37372200	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
26	chr5:37370000-37371600	Active TSS	Placenta Amnion	Placenta Amnion
27	chr5:37370000-37371800	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
28	chr5:37370000-37371800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
29	chr5:37370000-37371800	Active TSS	Fetal Intestine Large	intestine
30	chr5:37370000-37371800	Active TSS	HSMM	muscle
31	chr5:37370000-37372000	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
32	chr5:37370000-37372000	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
33	chr5:37370000-37372000	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
34	chr5:37370000-37372000	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
35	chr5:37370000-37372000	Active TSS	Breast Myoepithelial Primary Cells	Breast
36	chr5:37370000-37372000	Active TSS	Muscle Satellite Cultured Cells	--
37	chr5:37370000-37372000	Active TSS	Ovary	ovary
38	chr5:37370000-37372000	Active TSS	Right Atrium	heart
39	chr5:37370000-37372000	Active TSS	A549	lung
40	chr5:37370000-37372000	Active TSS	NHDF-Ad	bronchial
41	chr5:37370000-37372200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
42	chr5:37370000-37372200	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
43	chr5:37370000-37372200	Active TSS	Aorta	Aorta
44	chr5:37370000-37372400	Active TSS	HUES6 Cell Line	embryonic stem cell
45	chr5:37370000-37372400	Active TSS	HUES64 Cell Line	embryonic stem cell
46	chr5:37370000-37372400	Active TSS	GM12878-XiMat	blood
47	chr5:37370200-37371600	Active TSS	Primary hematopoietic stem cells short term culture	blood
48	chr5:37370200-37371800	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
49	chr5:37370200-37371800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
50	chr5:37370200-37371800	Active TSS	Primary T killer memory cells from peripheral blood	blood

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