Variant report

Variant	rs16922884
Chromosome Location	chr10:23277847-23277848
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:12)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:12 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr10:23277498..23278226-chr10:23324256..23324933,3	MCF-7	breast:
2	chr10:22873750..22875959-chr10:23275797..23278761,2	MCF-7	breast:
3	chr10:22862423..22863518-chr10:23277420..23278159,3	MCF-7	breast:
4	chr10:23277724..23278492-chr10:23356642..23357454,3	MCF-7	breast:
5	chr10:23277758..23279435-chr10:23283793..23286057,2	K562	blood:
6	chr10:23276691..23280787-chr10:23341219..23344727,5	K562	blood:
7	chr10:23276400..23278093-chr10:23282051..23283744,2	K562	blood:
8	chr10:22862942..22863550-chr10:23276977..23278428,4	K562	blood:
9	chr10:23277589..23278680-chr10:23356670..23357591,3	K562	blood:
10	chr10:23277505..23278426-chr10:23356864..23357372,2	MCF-7	breast:
11	chr10:23276792..23280787-chr10:23340649..23346324,8	K562	blood:
12	chr10:23273401..23275835-chr10:23276935..23280028,3	K562	blood:

No data

rs_ID	r²[population]
rs11013215	1.00[EUR][1000 genomes]
rs12098728	1.00[EUR][1000 genomes]
rs12245747	1.00[EUR][1000 genomes]
rs1343071	1.00[EUR][1000 genomes]
rs16922847	1.00[EUR][1000 genomes]
rs16922868	1.00[EUR][1000 genomes]
rs16922870	1.00[EUR][1000 genomes]
rs16922888	1.00[EUR][1000 genomes]
rs16922890	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16922900	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16922948	1.00[EUR][1000 genomes]
rs16922977	1.00[EUR][1000 genomes]
rs16922981	1.00[EUR][1000 genomes]
rs1886941	1.00[EUR][1000 genomes]
rs1886942	1.00[EUR][1000 genomes]
rs1886943	1.00[EUR][1000 genomes]
rs3888946	1.00[EUR][1000 genomes]
rs58925660	1.00[EUR][1000 genomes]
rs7076684	1.00[EUR][1000 genomes]
rs7080907	1.00[EUR][1000 genomes]
rs7092241	1.00[EUR][1000 genomes]
rs7096223	1.00[EUR][1000 genomes]
rs74121720	1.00[EUR][1000 genomes]
rs74121744	1.00[EUR][1000 genomes]
rs753669	1.00[EUR][1000 genomes]
rs7907979	1.00[EUR][1000 genomes]
rs7910703	1.00[EUR][1000 genomes]
rs7910975	1.00[EUR][1000 genomes]

Chromatin state (count:45 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23275400-23278000	Enhancers	Brain Cingulate Gyrus	brain
2	chr10:23275600-23278000	Enhancers	Brain Substantia Nigra	brain
3	chr10:23276000-23278000	Enhancers	Brain Angular Gyrus	brain
4	chr10:23276200-23278000	Enhancers	Liver	Liver
5	chr10:23276400-23278000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr10:23277200-23278200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr10:23277400-23278000	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr10:23277400-23278000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
9	chr10:23277600-23278000	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr10:23277600-23278000	Enhancers	Primary T cells from cord blood	blood
11	chr10:23277600-23278000	Enhancers	Primary T helper naive cells from peripheral blood	blood
12	chr10:23277600-23278000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr10:23277600-23278000	Flanking Active TSS	Brain Anterior Caudate	brain
14	chr10:23277600-23278000	Flanking Active TSS	Brain Hippocampus Middle	brain
15	chr10:23277600-23278000	Enhancers	Brain Inferior Temporal Lobe	brain
16	chr10:23277600-23278000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
17	chr10:23277600-23278000	Enhancers	Duodenum Mucosa	Duodenum
18	chr10:23277600-23278000	Enhancers	Duodenum Smooth Muscle	Duodenum
19	chr10:23277600-23278000	Enhancers	Fetal Heart	heart
20	chr10:23277600-23278000	Enhancers	Rectal Smooth Muscle	rectum
21	chr10:23277600-23278000	Enhancers	Skeletal Muscle Female	skeletal muscle
22	chr10:23277600-23278000	Enhancers	Stomach Mucosa	stomach
23	chr10:23277600-23278000	Enhancers	A549	lung
24	chr10:23277600-23278000	Enhancers	Dnd41	blood
25	chr10:23277600-23278200	Enhancers	Primary T helper cells PMA-I stimulated	--
26	chr10:23277600-23278200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
27	chr10:23277600-23278200	Enhancers	Fetal Kidney	kidney
28	chr10:23277600-23278200	Flanking Active TSS	Pancreatic Islets	Pancreatic Islet
29	chr10:23277600-23278400	Enhancers	HUES64 Cell Line	embryonic stem cell
30	chr10:23277600-23278400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
31	chr10:23277800-23278000	Enhancers	ES-I3 Cell Line	embryonic stem cell
32	chr10:23277800-23278000	Flanking Active TSS	Fetal Brain Male	brain
33	chr10:23277800-23278000	Flanking Active TSS	Fetal Lung	lung
34	chr10:23277800-23278000	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
35	chr10:23277800-23278000	Enhancers	Stomach Smooth Muscle	stomach
36	chr10:23277800-23278200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
37	chr10:23277800-23278200	Enhancers	HUES6 Cell Line	embryonic stem cell
38	chr10:23277800-23278200	Enhancers	iPS-18 Cell Line	embryonic stem cell
39	chr10:23277800-23278200	Active TSS	iPS-20b Cell Line	embryonic stem cell
40	chr10:23277800-23278200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
41	chr10:23277800-23278200	Enhancers	Colon Smooth Muscle	Colon
42	chr10:23277800-23278200	Flanking Active TSS	K562	blood
43	chr10:23277800-23278400	Enhancers	HUES48 Cell Line	embryonic stem cell
44	chr10:23277800-23278400	Enhancers	iPS-15b Cell Line	embryonic stem cell
45	chr10:23277800-23278400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood

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