Variant report

Variant	rs74121720
Chromosome Location	chr10:23345256-23345257
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:56)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:56 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr10:23161173..23163243-chr10:23343322..23345997,2	K562	blood:
2	chr10:23001481..23003754-chr10:23343244..23345931,3	K562	blood:
3	chr10:22258838..22260755-chr10:23343217..23345858,2	K562	blood:
4	chr10:22848101..22849924-chr10:23344227..23346477,2	K562	blood:
5	chr10:22630828..22632361-chr10:23344355..23345982,2	K562	blood:
6	chr10:23343462..23346237-chr10:23383575..23386517,2	K562	blood:
7	chr10:22280839..22282507-chr10:23344229..23345802,2	K562	blood:
8	chr10:23343708..23345852-chr10:23454621..23456498,2	K562	blood:
9	chr10:22283124..22285962-chr10:23343209..23346203,2	K562	blood:
10	chr10:22909318..22911709-chr10:23343539..23346250,3	K562	blood:
11	chr10:23303236..23310250-chr10:23341340..23346193,13	K562	blood:
12	chr10:23249462..23251978-chr10:23343537..23346404,2	K562	blood:
13	chr10:23105492..23108176-chr10:23344426..23345990,3	K562	blood:
14	chr10:22704943..22706985-chr10:23343129..23346102,2	K562	blood:
15	chr10:23276792..23280787-chr10:23340649..23346324,8	K562	blood:
16	chr10:22839689..22842283-chr10:23342301..23346033,4	K562	blood:
17	chr10:22609710..22611701-chr10:23343392..23345856,3	K562	blood:
18	chr10:22954452..22957017-chr10:23343036..23345890,3	K562	blood:
19	chr10:22866106..22869303-chr10:23343034..23346067,3	K562	blood:
20	chr10:21817965..21819754-chr10:23342312..23345868,3	K562	blood:
21	chr10:22251092..22253424-chr10:23344303..23346023,2	K562	blood:
22	chr10:22913134..22918197-chr10:23342744..23346247,5	K562	blood:
23	chr10:22716118..22719238-chr10:23342778..23345832,4	K562	blood:
24	chr10:22904615..22907385-chr10:23344291..23346144,2	K562	blood:
25	chr10:23112958..23115115-chr10:23343406..23346225,2	K562	blood:
26	chr10:23010619..23013032-chr10:23343803..23345736,2	K562	blood:
27	chr10:22954452..22957400-chr10:23343036..23345411,3	K562	blood:
28	chr10:22603135..22605329-chr10:23344407..23346619,2	K562	blood:
29	chr10:23342800..23345390-chr10:24862811..24864494,2	K562	blood:
30	chr10:22858649..22861310-chr10:23343299..23345785,2	K562	blood:
31	chr10:23076401..23079823-chr10:23343221..23346091,3	K562	blood:
32	chr10:22733923..22736480-chr10:23343252..23345613,2	K562	blood:
33	chr10:22892740..22895922-chr10:23342638..23345686,4	K562	blood:
34	chr10:22894422..22896822-chr10:23343724..23345259,2	K562	blood:
35	chr10:23221926..23223971-chr10:23343318..23345791,2	K562	blood:
36	chr10:23286320..23291300-chr10:23340827..23345371,11	K562	blood:
37	chr10:22918306..22922347-chr10:23342805..23345758,6	K562	blood:
38	chr10:22609231..22611555-chr10:23344490..23346414,2	MCF-7	breast:
39	chr10:23022751..23025731-chr10:23344212..23345914,2	K562	blood:
40	chr10:22969199..22971495-chr10:23343422..23346114,2	K562	blood:
41	chr10:23331545..23334500-chr10:23344976..23347528,2	MCF-7	breast:
42	chr10:23344133..23346198-chr10:23369259..23371039,3	K562	blood:
43	chr10:22867803..22869789-chr10:23344179..23345992,2	K562	blood:
44	chr10:23341115..23345773-chr10:23377859..23381987,5	K562	blood:
45	chr10:23302995..23309769-chr10:23341340..23346193,8	K562	blood:
46	chr10:22517643..22520681-chr10:23343388..23345713,3	K562	blood:
47	chr10:22609767..22611425-chr10:23344118..23345806,2	K562	blood:
48	chr10:23268197..23270215-chr10:23343251..23346098,3	K562	blood:
49	chr10:22911051..22913869-chr10:23344433..23348720,3	K562	blood:
50	chr10:22298312..22301292-chr10:23342361..23345861,3	K562	blood:

No data

Variant related genes	Relation type
ENSG00000148444	Chromatin interaction
ENSG00000269897	Chromatin interaction
ENSG00000168283	Chromatin interaction
ENSG00000252049	Chromatin interaction
ENSG00000150867	Chromatin interaction
ENSG00000223131	Chromatin interaction
ENSG00000148450	Chromatin interaction

rs_ID	r²[population]
rs11013215	1.00[EUR][1000 genomes]
rs12098728	1.00[EUR][1000 genomes]
rs12245747	1.00[EUR][1000 genomes]
rs1343071	1.00[EUR][1000 genomes]
rs16922847	1.00[EUR][1000 genomes]
rs16922868	1.00[EUR][1000 genomes]
rs16922870	1.00[EUR][1000 genomes]
rs16922884	1.00[EUR][1000 genomes]
rs16922888	1.00[EUR][1000 genomes]
rs16922890	1.00[EUR][1000 genomes]
rs16922900	1.00[EUR][1000 genomes]
rs16922948	1.00[EUR][1000 genomes]
rs16922977	1.00[EUR][1000 genomes]
rs16922981	1.00[EUR][1000 genomes]
rs1886941	1.00[EUR][1000 genomes]
rs1886942	1.00[EUR][1000 genomes]
rs1886943	1.00[EUR][1000 genomes]
rs3888946	1.00[EUR][1000 genomes]
rs58925660	1.00[EUR][1000 genomes]
rs7076684	1.00[EUR][1000 genomes]
rs7080907	1.00[EUR][1000 genomes]
rs7092241	1.00[EUR][1000 genomes]
rs7096223	1.00[EUR][1000 genomes]
rs74121744	1.00[EUR][1000 genomes]
rs753669	1.00[EUR][1000 genomes]
rs7907979	1.00[EUR][1000 genomes]
rs7910703	1.00[EUR][1000 genomes]
rs7910975	1.00[EUR][1000 genomes]

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23336600-23348800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr10:23340600-23345800	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr10:23341800-23345400	Enhancers	iPS-20b Cell Line	embryonic stem cell
4	chr10:23342200-23348600	Weak transcription	H1 Cell Line	embryonic stem cell
5	chr10:23342400-23350000	Weak transcription	Stomach Mucosa	stomach
6	chr10:23343000-23345400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr10:23343200-23354200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr10:23343400-23345600	Enhancers	iPS-15b Cell Line	embryonic stem cell
9	chr10:23343800-23345400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr10:23343800-23345400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr10:23343800-23345600	Enhancers	iPS-18 Cell Line	embryonic stem cell
12	chr10:23344000-23345600	Enhancers	HUES48 Cell Line	embryonic stem cell
13	chr10:23344000-23345800	Enhancers	HUES6 Cell Line	embryonic stem cell
14	chr10:23344000-23345800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
15	chr10:23344000-23349000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
16	chr10:23344200-23345400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr10:23344800-23345400	Enhancers	Cortex derived primary cultured neurospheres	brain
18	chr10:23344800-23345400	Enhancers	Fetal Kidney	kidney
19	chr10:23344800-23345600	Enhancers	Brain Anterior Caudate	brain
20	chr10:23345000-23349000	Weak transcription	H9 Cell Line	embryonic stem cell
21	chr10:23345000-23349800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
22	chr10:23345200-23345400	Enhancers	ES-I3 Cell Line	embryonic stem cell
23	chr10:23345200-23345400	Enhancers	K562	blood
24	chr10:23345200-23352000	Weak transcription	Duodenum Mucosa	Duodenum

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