Variant report

Variant	rs7092241
Chromosome Location	chr10:23223106-23223107
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs11013215	1.00[EUR][1000 genomes]
rs12098728	1.00[EUR][1000 genomes]
rs1343071	1.00[EUR][1000 genomes]
rs16922842	0.88[YRI][hapmap]
rs16922847	0.88[YRI][hapmap];1.00[EUR][1000 genomes]
rs16922868	0.87[YRI][hapmap];1.00[EUR][1000 genomes]
rs16922870	0.88[YRI][hapmap];1.00[EUR][1000 genomes]
rs16922884	1.00[EUR][1000 genomes]
rs16922888	1.00[EUR][1000 genomes]
rs16922890	1.00[EUR][1000 genomes]
rs16922900	1.00[EUR][1000 genomes]
rs16922948	1.00[EUR][1000 genomes]
rs16922977	1.00[EUR][1000 genomes]
rs16922981	1.00[EUR][1000 genomes]
rs1886941	1.00[EUR][1000 genomes]
rs1886942	1.00[EUR][1000 genomes]
rs1886943	1.00[EUR][1000 genomes]
rs3888946	1.00[EUR][1000 genomes]
rs58925660	1.00[EUR][1000 genomes]
rs7080886	1.00[AMR][1000 genomes]
rs7080907	1.00[EUR][1000 genomes]
rs7096223	1.00[EUR][1000 genomes]
rs73600507	1.00[EUR][1000 genomes]
rs74121720	1.00[EUR][1000 genomes]
rs74121744	1.00[EUR][1000 genomes]
rs753669	1.00[EUR][1000 genomes]
rs7902055	1.00[AMR][1000 genomes]
rs7907979	1.00[EUR][1000 genomes]
rs7910703	1.00[EUR][1000 genomes]
rs7910975	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2764013	chr10:23087298-23239345	Enhancers Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23222000-23223400	Weak transcription	Brain Anterior Caudate	brain
2	chr10:23222600-23223600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr10:23222800-23223200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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