Variant report

Variant	rs7096223
Chromosome Location	chr10:23397373-23397374
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:23384510..23386607-chr10:23394360..23397420,4	MCF-7	breast:
2	chr10:23392239..23394396-chr10:23396645..23398938,2	K562	blood:

Variant related genes	Relation type
ENSG00000148450	Chromatin interaction

rs_ID	r²[population]
rs11013215	1.00[EUR][1000 genomes]
rs12098728	1.00[EUR][1000 genomes]
rs12245747	1.00[EUR][1000 genomes]
rs1343071	1.00[EUR][1000 genomes]
rs16922847	1.00[EUR][1000 genomes]
rs16922868	1.00[EUR][1000 genomes]
rs16922870	1.00[EUR][1000 genomes]
rs16922884	1.00[EUR][1000 genomes]
rs16922888	1.00[EUR][1000 genomes]
rs16922890	1.00[EUR][1000 genomes]
rs16922900	1.00[EUR][1000 genomes]
rs16922948	1.00[EUR][1000 genomes]
rs16922977	1.00[EUR][1000 genomes]
rs16922981	1.00[EUR][1000 genomes]
rs1886941	1.00[EUR][1000 genomes]
rs1886942	1.00[EUR][1000 genomes]
rs1886943	1.00[EUR][1000 genomes]
rs3888946	1.00[EUR][1000 genomes]
rs58925660	1.00[EUR][1000 genomes]
rs7076684	1.00[EUR][1000 genomes]
rs7080907	1.00[EUR][1000 genomes]
rs7092241	1.00[EUR][1000 genomes]
rs74121720	1.00[EUR][1000 genomes]
rs74121744	1.00[EUR][1000 genomes]
rs753669	1.00[EUR][1000 genomes]
rs7907979	1.00[EUR][1000 genomes]
rs7910703	1.00[EUR][1000 genomes]
rs7910975	1.00[EUR][1000 genomes]

Chromatin state (count:114 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23385800-23401800	Weak transcription	Brain Germinal Matrix	brain
2	chr10:23385800-23409400	Weak transcription	NH-A	brain
3	chr10:23386000-23412000	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr10:23386400-23409600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
5	chr10:23386400-23411200	Weak transcription	Primary B cells from peripheral blood	blood
6	chr10:23386400-23411200	Weak transcription	Muscle Satellite Cultured Cells	--
7	chr10:23386600-23397800	Weak transcription	NHDF-Ad	bronchial
8	chr10:23386600-23398000	Weak transcription	GM12878-XiMat	blood
9	chr10:23386600-23400600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
10	chr10:23386600-23401800	Weak transcription	Fetal Brain Male	brain
11	chr10:23386600-23403600	Weak transcription	Fetal Brain Female	brain
12	chr10:23386600-23407800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
13	chr10:23386600-23410600	Weak transcription	Fetal Thymus	thymus
14	chr10:23386600-23412200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
15	chr10:23387200-23411400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
16	chr10:23388800-23405200	Weak transcription	Psoas Muscle	Psoas
17	chr10:23389200-23402200	Weak transcription	HUES6 Cell Line	embryonic stem cell
18	chr10:23389200-23407400	Weak transcription	Fetal Kidney	kidney
19	chr10:23389400-23401200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
20	chr10:23389400-23402000	Weak transcription	HUES48 Cell Line	embryonic stem cell
21	chr10:23389400-23410600	Weak transcription	Stomach Mucosa	stomach
22	chr10:23389600-23409000	Weak transcription	Placenta Amnion	Placenta Amnion
23	chr10:23389600-23418600	Weak transcription	H9 Cell Line	embryonic stem cell
24	chr10:23389800-23399200	Weak transcription	HepG2	liver
25	chr10:23389800-23403800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
26	chr10:23390000-23405600	Weak transcription	NHEK	skin
27	chr10:23390000-23408200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
28	chr10:23390000-23411800	Weak transcription	HUVEC	blood vessel
29	chr10:23390200-23409800	Weak transcription	Small Intestine	intestine
30	chr10:23392400-23404000	Weak transcription	Primary B cells from cord blood	blood
31	chr10:23392400-23410800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
32	chr10:23392800-23404200	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
33	chr10:23392800-23410800	Strong transcription	Primary T cells from cord blood	blood
34	chr10:23392800-23410800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
35	chr10:23393000-23398000	Strong transcription	Rectal Mucosa Donor 31	rectum
36	chr10:23393000-23398400	Strong transcription	Fetal Intestine Small	intestine
37	chr10:23393000-23404200	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
38	chr10:23393000-23404200	Strong transcription	Fetal Muscle Trunk	muscle
39	chr10:23393000-23405800	Strong transcription	Fetal Intestine Large	intestine
40	chr10:23393000-23410600	Strong transcription	Fetal Stomach	stomach
41	chr10:23393200-23398200	Strong transcription	Brain Anterior Caudate	brain
42	chr10:23393200-23398200	Strong transcription	Rectal Mucosa Donor 29	rectum
43	chr10:23393200-23400600	Strong transcription	Primary monocytes fromperipheralblood	blood
44	chr10:23393200-23400800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
45	chr10:23393200-23400800	Strong transcription	Skeletal Muscle Male	skeletal muscle
46	chr10:23393200-23401600	Strong transcription	Fetal Lung	lung
47	chr10:23393200-23402200	Strong transcription	Colon Smooth Muscle	Colon
48	chr10:23393200-23404000	Strong transcription	Monocytes-CD14+_RO01746	blood
49	chr10:23393200-23404600	Strong transcription	Duodenum Smooth Muscle	Duodenum
50	chr10:23393200-23405800	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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